Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC090888.2-201ENST00000559765 1144 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AP002826.1-201ENST00000608835 315 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 RNU6-452P-201ENST00000384406 107 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 NDUFS5P1-201ENST00000405668 289 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 ISCA1P1-201ENST00000426679 387 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AC073261.1-201ENST00000429409 121 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AC132479.1-201ENST00000449160 144 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 ZNF705CP-201ENST00000530515 889 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AC025423.2-201ENST00000537570 439 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 MIR3921-201ENST00000577308 85 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AC013468.1-201ENST00000608680 598 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 SNORD114-9-201ENST00000364370 72 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 NFU1P2-201ENST00000448700 469 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AC092470.1-201ENST00000546187 132 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AC006199.1-201ENST00000548728 219 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 AC107304.1-201ENST00000604229 296 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 MIR3666-201ENST00000607845 111 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 MIR8063-201ENST00000621930 81 ntBASIC-0.15□□□□□ -2.43
VPS13DQ5THJ4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 AL355796.1-201ENST00000406706 323 ntBASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 RN7SKP266-201ENST00000410232 287 ntBASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 RNU4-78P-201ENST00000410940 126 ntBASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 SNORA31.6-201ENST00000516241 130 ntBASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 RNU6-889P-201ENST00000517189 103 ntBASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 AC009712.1-201ENST00000564938 316 ntBASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 AL162730.1-201ENST00000605734 292 ntBASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 AC096586.2-201ENST00000610260 441 ntBASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 AL353149.1-201ENST00000610667 244 ntBASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 AL596245.1-201ENST00000618994 362 ntBASIC-0.16□□□□□ -2.43
VPS13DQ5THJ4 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 SNORA9.1-201ENST00000362412 131 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 RPS27P16-201ENST00000425758 201 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 MIR378F-201ENST00000578143 78 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 MIR605-201ENST00000385078 83 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 GTF2IP20-201ENST00000431663 360 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 RNU7-159P-201ENST00000459284 62 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 AL049830.1-201ENST00000468034 425 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 AC025423.5-201ENST00000550230 219 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 BBIP1P1-201ENST00000602999 279 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 AC091805.2-201ENST00000603848 235 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 Z82243.1-201ENST00000609432 473 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 AL157786.1-207ENST00000627771 695 ntBASIC-0.16□□□□□ -2.44
VPS13DQ5THJ4 AC104651.1-201ENST00000427559 735 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 RNU6-491P-201ENST00000516099 110 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 ZNF92P3-201ENST00000596594 954 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AL513534.2-201ENST00000603836 250 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC105148.1-201ENST00000604961 409 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC009033.1-201ENST00000624279 431 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 CALM2P3-201ENST00000400429 449 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC233702.2-202ENST00000562547 291 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 RNY4P24-201ENST00000362735 96 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 MIR610-201ENST00000385139 96 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 MTND2P19-201ENST00000449129 1012 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AC007349.4-201ENST00000608114 532 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 uc_338.36-201ENST00000622331 158 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 SNORD118-201ENST00000363593 134 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 RNU6-72P-201ENST00000384285 79 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 RPS3AP1-201ENST00000413190 320 ntBASIC-0.17□□□□□ -2.44
VPS13DQ5THJ4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms