Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.2□□□□□ -1.9
TTC39AQ5SRH9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 RNU6-1013P-201ENST00000384180 107 ntBASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 MIR450B-201ENST00000401182 78 ntBASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 MIR548F5-201ENST00000408421 86 ntBASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 RNU2-33P-201ENST00000410344 192 ntBASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 AC092573.2-201ENST00000434546 243 ntBASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 FABP5P15-201ENST00000453566 214 ntBASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 RNU6-56P-201ENST00000516986 93 ntBASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 MIR5692A1-201ENST00000580523 69 ntBASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 AC078899.3-201ENST00000599065 212 ntBASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 AL353621.2-201ENST00000605340 133 ntBASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
TTC39AQ5SRH9 SNORD3E-201ENST00000362899 217 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 RNU6-741P-201ENST00000383889 107 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 SNORA75B-201ENST00000384053 137 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 RNU6-1179P-201ENST00000384667 107 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 AL031121.1-201ENST00000406553 254 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 VN1R36P-201ENST00000414936 291 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 AC093151.1-201ENST00000427711 313 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 AL590383.1-201ENST00000428602 75 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 AC139453.3-201ENST00000493276 369 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 RNA5SP385-201ENST00000515947 110 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 RNA5SP76-201ENST00000516277 87 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 RNA5SP282-201ENST00000516355 108 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 RNU6-1069P-201ENST00000516612 133 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 RNU6-1153P-201ENST00000516760 105 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 RNU6-566P-201ENST00000516790 107 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 AL157871.3-201ENST00000557231 293 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 MIR1273C-201ENST00000578669 77 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 MIR3941-201ENST00000582572 103 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 AC019159.1-201ENST00000605094 187 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 AL022345.1-201ENST00000607292 135 ntBASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TTC39AQ5SRH9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 AC007785.2-201ENST00000598627 1916 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 AC138393.1-203ENST00000327086 343 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 Y_RNA.33-201ENST00000362591 102 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 Y_RNA.419-201ENST00000384041 102 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 MIR301A-201ENST00000385261 86 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 RNU6-1197P-201ENST00000391183 107 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 RNU6-1025P-201ENST00000410629 104 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 RNA5SP344-201ENST00000411081 104 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 RNA5SP492-201ENST00000411330 114 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 SRIP1-201ENST00000489235 288 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 RNU6-1332P-201ENST00000516666 104 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 RNU6-323P-201ENST00000521915 107 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 COPS8P3-201ENST00000526024 482 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 AP003122.3-201ENST00000526316 255 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 CASP1P1-201ENST00000526345 212 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 AC084851.1-201ENST00000529105 249 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 TRAV28-201ENST00000557548 323 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 MIR4719-201ENST00000585233 84 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 POLR3GP2-201ENST00000588366 668 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 AL050343.2-201ENST00000607338 280 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 MIR6817-201ENST00000615588 66 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 AL031601.2-202ENST00000622650 282 ntBASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TTC39AQ5SRH9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.16□□□□□ -1.9
TTC39AQ5SRH9 RNA5SP68-201ENST00000363885 119 ntBASIC3.16□□□□□ -1.9
TTC39AQ5SRH9 Y_RNA.212-201ENST00000364177 102 ntBASIC3.16□□□□□ -1.9
TTC39AQ5SRH9 RNU6-266P-201ENST00000364225 107 ntBASIC3.16□□□□□ -1.9
TTC39AQ5SRH9 Y_RNA.339-201ENST00000365325 102 ntBASIC3.16□□□□□ -1.9
TTC39AQ5SRH9 RNA5SP252-201ENST00000391131 119 ntBASIC3.16□□□□□ -1.9
TTC39AQ5SRH9 RNU4-14P-201ENST00000410858 122 ntBASIC3.16□□□□□ -1.9
TTC39AQ5SRH9 RNU6-1304P-201ENST00000411374 106 ntBASIC3.16□□□□□ -1.9
TTC39AQ5SRH9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TTC39AQ5SRH9 CYCSP33-201ENST00000414485 327 ntBASIC3.16□□□□□ -1.9
TTC39AQ5SRH9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.16□□□□□ -1.9
TTC39AQ5SRH9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.16□□□□□ -1.9
TTC39AQ5SRH9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms