| ZIC1 | Q15915 | Y_RNA.381-201 | ENST00000365666 | 102 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | Y_RNA.436-201 | ENST00000384097 | 102 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU6-1127P-201 | ENST00000384580 | 107 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU6-220P-201 | ENST00000390919 | 107 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU6-1158P-201 | ENST00000391167 | 107 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU6-903P-201 | ENST00000391270 | 109 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | MORN2-203 | ENST00000409131 | 544 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | TOMM20P4-201 | ENST00000427861 | 435 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RPL30P4-201 | ENST00000429309 | 333 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | DLGAP5P1-201 | ENST00000430307 | 464 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | DNAJC19P4-201 | ENST00000440115 | 345 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AP000936.1-201 | ENST00000442124 | 483 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC011753.1-201 | ENST00000451001 | 220 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | MED28P2-201 | ENST00000475771 | 317 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RPS29P21-201 | ENST00000496272 | 170 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC074344.1-201 | ENST00000512823 | 224 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNA5SP112-201 | ENST00000515937 | 99 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU5B-3P-201 | ENST00000516601 | 115 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | POC1B-211 | ENST00000549504 | 581 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | SNRPGP18-201 | ENST00000553000 | 214 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AGGF1P4-201 | ENST00000568249 | 801 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | MTCYBP33-201 | ENST00000575007 | 1130 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC004223.2-201 | ENST00000590309 | 544 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC022335.1-204 | ENST00000590779 | 600 nt | APPRIS ALT2 TSL 2 BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC078795.2-201 | ENST00000602835 | 1252 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AP001596.2-201 | ENST00000608410 | 312 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC087241.4-201 | ENST00000612441 | 480 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC009831.4-201 | ENST00000620744 | 325 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | SCARNA4-202 | ENST00000625402 | 129 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC130466.1-201 | ENST00000636354 | 4683 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | LRIF1-203 | ENST00000494675 | 1912 nt | APPRIS ALT2 TSL 2 BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC009975.1-201 | ENST00000634588 | 2698 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | CUL3-203 | ENST00000409096 | 2701 nt | TSL 1 (best) BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | DDIAS-201 | ENST00000329143 | 3367 nt | APPRIS P2 TSL 1 (best) BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | KLRA1P-202 | ENST00000510134 | 1410 nt | TSL 5 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | OR5AK2-201 | ENST00000326855 | 996 nt | APPRIS P1 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU6-552P-201 | ENST00000362869 | 119 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU6-486P-201 | ENST00000363116 | 107 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU4-75P-201 | ENST00000364621 | 146 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU6-1303P-201 | ENST00000364841 | 107 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU6-517P-201 | ENST00000384362 | 110 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU6-393P-201 | ENST00000384475 | 107 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC093157.2-201 | ENST00000414686 | 671 nt | TSL 5 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | LINC02331-201 | ENST00000418927 | 602 nt | TSL 5 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | MTCYBP8-201 | ENST00000422855 | 651 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | BX276092.3-201 | ENST00000424182 | 230 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | CR769767.1-201 | ENST00000436337 | 346 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC004869.2-201 | ENST00000436501 | 229 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC025428.1-201 | ENST00000444137 | 403 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AL353705.4-201 | ENST00000449661 | 238 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RPL7P43-201 | ENST00000478876 | 753 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RPL36AP48-201 | ENST00000485521 | 314 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC090096.1-201 | ENST00000489168 | 390 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC106892.1-201 | ENST00000491608 | 406 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | LINC02174-201 | ENST00000508977 | 553 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | LNX1-AS1-203 | ENST00000511989 | 488 nt | TSL 2 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | LRRC34P2-201 | ENST00000514850 | 553 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | SNORA25.11-201 | ENST00000515935 | 105 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNA5SP82-201 | ENST00000516707 | 92 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AP003469.3-201 | ENST00000518090 | 473 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC068992.1-202 | ENST00000519280 | 270 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | PWRN1-205 | ENST00000565295 | 465 nt | TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC012507.3-201 | ENST00000603556 | 477 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU6-91P-201 | ENST00000607774 | 107 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC017083.3-201 | ENST00000609955 | 700 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC104237.2-201 | ENST00000612456 | 443 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC008162.2-201 | ENST00000613352 | 291 nt | APPRIS P1 TSL 3 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | DAOA-AS1_2.1-201 | ENST00000614829 | 187 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AL449363.1-201 | ENST00000617815 | 186 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC026585.1-201 | ENST00000619582 | 524 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AL596220.1-201 | ENST00000622121 | 542 nt | TSL 4 BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AL031601.2-202 | ENST00000622650 | 282 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | OR5AK4P-201 | ENST00000635912 | 903 nt | BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | HAS2-201 | ENST00000303924 | 4190 nt | APPRIS P1 TSL 1 (best) BASIC | 2.12 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | NAALADL2-203 | ENST00000454872 | 9865 nt | APPRIS P1 TSL 1 (best) BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RGS18-201 | ENST00000367460 | 2150 nt | APPRIS P1 TSL 1 (best) BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC138393.1-203 | ENST00000327086 | 343 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU6-996P-201 | ENST00000365438 | 107 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU6-843P-201 | ENST00000384454 | 104 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | SNORA16.2-201 | ENST00000390991 | 127 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | SNORD70.1-201 | ENST00000391007 | 85 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RAP1BP3-201 | ENST00000407180 | 549 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RNU4ATAC16P-201 | ENST00000408512 | 126 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC097463.2-201 | ENST00000421074 | 142 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AL162726.4-201 | ENST00000422010 | 673 nt | TSL 5 BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | DPH3P2-201 | ENST00000422618 | 250 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | LINC02532-205 | ENST00000430094 | 628 nt | TSL 5 BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AL606489.2-201 | ENST00000433886 | 234 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC096638.1-201 | ENST00000444678 | 216 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | MTCO2P7-201 | ENST00000446518 | 666 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AL157882.1-201 | ENST00000447148 | 429 nt | TSL 3 BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC073415.1-201 | ENST00000449240 | 153 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | SNRPFP3-201 | ENST00000457792 | 225 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | SCARNA18-201 | ENST00000459004 | 134 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AL163973.1-201 | ENST00000484753 | 577 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | PLS1-AS1-201 | ENST00000485338 | 346 nt | TSL 3 BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RPL9P6-201 | ENST00000492764 | 598 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | RPL22P13-201 | ENST00000493291 | 347 nt | BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | AC093831.1-201 | ENST00000509166 | 434 nt | TSL 3 BASIC | 2.11 | □□□□□ -2.07 | | |
| ZIC1 | Q15915 | LNX1-AS1-202 | ENST00000510785 | 550 nt | TSL 2 BASIC | 2.11 | □□□□□ -2.07 | | |