Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 RPS15AP9-201ENST00000439856 381 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC008834.1-201ENST00000511612 175 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 RNU5A-4P-201ENST00000516588 111 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 RNU6-678P-201ENST00000516832 109 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 RNU6-1183P-201ENST00000517054 60 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 RNU6-1315P-201ENST00000517187 99 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 MIR3167-201ENST00000579623 85 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 SNORD114-19-201ENST00000363072 75 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 U8.3-201ENST00000363321 132 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 RNU6-188P-201ENST00000364207 107 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 RNU1-78P-201ENST00000391248 165 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC244636.1-201ENST00000421152 228 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 AL160275.3-201ENST00000423876 471 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 RSU1P2-202ENST00000437884 485 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CACNA1SQ13698 SNORA44.1-201ENST00000517031 108 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC011712.1-201ENST00000588959 234 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 AL138963.2-201ENST00000605137 226 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC121334.2-201ENST00000605387 271 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 MIR15A-201ENST00000607334 83 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 PART1_2.1-201ENST00000612397 250 ntBASIC1.33□□□□□ -2.2
CACNA1SQ13698 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.33□□□□□ -2.2
CACNA1SQ13698 AC092104.1-201ENST00000497346 1441 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 RNU5A-8P-201ENST00000364102 114 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 RNU4-28P-201ENST00000364739 141 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 U3.13-201ENST00000364804 214 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 RNU2-49P-201ENST00000410666 184 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 SNRPEP10-201ENST00000420249 274 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 AC096920.1-201ENST00000423991 241 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.32□□□□□ -2.2
CACNA1SQ13698 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.32□□□□□ -2.2
CACNA1SQ13698 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.32□□□□□ -2.2
CACNA1SQ13698 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.32□□□□□ -2.2
CACNA1SQ13698 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.32□□□□□ -2.2
CACNA1SQ13698 MTND4LP16-201ENST00000440828 295 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.32□□□□□ -2.2
CACNA1SQ13698 AC093852.1-201ENST00000503587 266 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 AC010587.2-201ENST00000511727 448 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 RNA5SP137-201ENST00000516833 135 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 CBX3P8-201ENST00000532412 525 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 AL020996.3-201ENST00000606617 222 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 AC096772.1-201ENST00000609146 564 ntBASIC1.32□□□□□ -2.2
CACNA1SQ13698 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.32□□□□□ -2.2
CACNA1SQ13698 Y_RNA.302-201ENST00000364997 102 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 RNU6-83P-201ENST00000384568 112 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 RNU2-23P-201ENST00000410545 195 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 RPL22P18-201ENST00000417197 377 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 AC093106.2-201ENST00000428212 385 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 TXNL1P1-201ENST00000429528 554 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 MTND3P1-201ENST00000441336 220 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 AP000542.1-201ENST00000448473 371 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 FAM206BP-201ENST00000510179 541 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 RNU6-64P-201ENST00000517119 105 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 ELOCP5-201ENST00000604924 333 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 AL159153.1-201ENST00000619688 317 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 AC138627.2-201ENST00000624202 601 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 AL136313.1-201ENST00000624804 202 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 MTND5P42-201ENST00000637720 498 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 AC099654.8-201ENST00000637757 681 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CACNA1SQ13698 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 RNU6-1210P-201ENST00000363775 107 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 ELOCP17-201ENST00000414751 326 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 RPL37P21-201ENST00000435890 276 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 MTND4P25-201ENST00000441039 533 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 OR6C5P-201ENST00000452388 923 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.31□□□□□ -2.2
CACNA1SQ13698 TRAV32-201ENST00000553993 340 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 BNIP3P25-201ENST00000596023 559 ntBASIC1.31□□□□□ -2.2
CACNA1SQ13698 AL596327.1-201ENST00000603629 213 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms