Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
FOXF2Q12947 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FOXF2Q12947 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
FOXF2Q12947 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXF2Q12947 AP000560.1-201ENST00000624150 1937 ntBASIC3.15□□□□□ -1.9
FOXF2Q12947 Z75746.1-201ENST00000440243 2080 ntBASIC3.15□□□□□ -1.9
FOXF2Q12947 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
FOXF2Q12947 RNU4-35P-201ENST00000362588 141 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 RNU1-18P-201ENST00000363062 164 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 RNU6-595P-201ENST00000363944 107 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 MIR521-1-201ENST00000384902 87 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 AL603910.2-201ENST00000407268 136 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 AP000275.1-201ENST00000411943 390 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 EI24P1-201ENST00000416584 867 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXF2Q12947 SDAD1P3-201ENST00000427380 333 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXF2Q12947 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXF2Q12947 AC139453.3-201ENST00000493276 369 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 AC005921.1-201ENST00000510589 286 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXF2Q12947 SNORA31.6-201ENST00000516241 130 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 RNU2-58P-201ENST00000516403 183 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 RNA5SP290-201ENST00000517133 127 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.15□□□□□ -1.91
FOXF2Q12947 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.15□□□□□ -1.91
FOXF2Q12947 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXF2Q12947 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXF2Q12947 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXF2Q12947 MIR3910-1-201ENST00000580936 111 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 AC006557.5-201ENST00000603126 811 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 AC008962.1-201ENST00000605729 304 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 AC090132.2-201ENST00000615881 347 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 AC091903.1-201ENST00000624322 454 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FOXF2Q12947 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXF2Q12947 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
FOXF2Q12947 AC006504.1-201ENST00000562493 3666 ntBASIC3.15□□□□□ -1.91
FOXF2Q12947 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
FOXF2Q12947 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXF2Q12947 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.14□□□□□ -1.91
FOXF2Q12947 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
FOXF2Q12947 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXF2Q12947 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.14□□□□□ -1.91
FOXF2Q12947 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FOXF2Q12947 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FOXF2Q12947 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
FOXF2Q12947 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXF2Q12947 RNY1-201ENST00000364228 113 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 Y_RNA.245-201ENST00000364493 95 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 SNORD14B-201ENST00000364533 90 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 Y_RNA.352-201ENST00000365439 102 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 RNU6-827P-201ENST00000365553 106 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 RNU6-886P-201ENST00000384319 105 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
FOXF2Q12947 MTHFD2P2-201ENST00000407725 247 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 RPL23AP83-201ENST00000434984 473 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 PIGFP3-201ENST00000441918 722 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 AL138752.1-201ENST00000452964 351 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 snoU13.4-201ENST00000458916 104 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 U3.44-201ENST00000458938 192 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 RPL21P10-201ENST00000463521 490 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 RPS20P22-201ENST00000473700 357 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.14□□□□□ -1.91
FOXF2Q12947 AL359273.1-201ENST00000510918 627 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 RNU4-71P-201ENST00000516258 113 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 AC025755.1-201ENST00000521306 278 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 DEFB108E-201ENST00000524692 240 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 MIR5696-201ENST00000578474 85 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 AC009314.1-201ENST00000603871 304 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 MIR7851-201ENST00000610611 160 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 AL450472.1-202ENST00000637286 180 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.14□□□□□ -1.91
FOXF2Q12947 MTND5P9-201ENST00000503854 1755 ntBASIC3.14□□□□□ -1.91
FOXF2Q12947 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXF2Q12947 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.14□□□□□ -1.91
FOXF2Q12947 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXF2Q12947 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FOXF2Q12947 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXF2Q12947 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXF2Q12947 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXF2Q12947 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
FOXF2Q12947 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.13□□□□□ -1.91
FOXF2Q12947 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
FOXF2Q12947 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
FOXF2Q12947 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FOXF2Q12947 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXF2Q12947 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXF2Q12947 MIR412-201ENST00000362142 91 ntBASIC3.13□□□□□ -1.91
FOXF2Q12947 SNORA31-201ENST00000362607 130 ntBASIC3.13□□□□□ -1.91
FOXF2Q12947 snoU2_19.2-201ENST00000363024 80 ntBASIC3.13□□□□□ -1.91
FOXF2Q12947 RNA5SP267-201ENST00000364893 126 ntBASIC3.13□□□□□ -1.91
FOXF2Q12947 RNA5SP189-201ENST00000364920 115 ntBASIC3.13□□□□□ -1.91
FOXF2Q12947 Y_RNA.458-201ENST00000384240 102 ntBASIC3.13□□□□□ -1.91
FOXF2Q12947 SNORD17-201ENST00000390930 237 ntBASIC3.13□□□□□ -1.91
FOXF2Q12947 MIR1183-201ENST00000408856 89 ntBASIC3.13□□□□□ -1.91
FOXF2Q12947 RNA5SP494-201ENST00000410653 129 ntBASIC3.13□□□□□ -1.91
FOXF2Q12947 RNU2-37P-201ENST00000410695 177 ntBASIC3.13□□□□□ -1.91
FOXF2Q12947 SNORD56-201ENST00000413522 71 ntBASIC3.13□□□□□ -1.91
FOXF2Q12947 AC017079.2-201ENST00000416102 485 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms