Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 HSPA8P1-201ENST00000425843 1833 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 AC017071.1-201ENST00000564407 2204 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 MIR208A-201ENST00000362287 71 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 RNU6-858P-201ENST00000362436 107 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 RNU6-1077P-201ENST00000410506 102 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 RNU6-1245P-201ENST00000411130 106 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 AP000275.1-201ENST00000411943 390 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 AL356968.1-201ENST00000416622 474 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 AC099799.1-201ENST00000439809 192 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 CENPBD1P1-201ENST00000464061 469 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 RPL7P47-201ENST00000497299 556 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.93□□□□□ -1.78
SSRP1Q08945 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.93□□□□□ -1.78
SSRP1Q08945 MIR5696-201ENST00000578474 85 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 AL158827.2-201ENST00000602494 330 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 AC008739.3-201ENST00000603262 127 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 AP001836.1-201ENST00000604675 523 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 HMGB1P24-202ENST00000615653 685 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 AC091925.1-201ENST00000623204 462 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 AL691447.3-201ENST00000635020 330 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SSRP1Q08945 ZNF299P-201ENST00000406845 1804 ntBASIC3.93□□□□□ -1.78
SSRP1Q08945 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.93□□□□□ -1.78
SSRP1Q08945 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.92□□□□□ -1.78
SSRP1Q08945 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
SSRP1Q08945 RNY1P16-201ENST00000363063 111 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 RNU1-115P-201ENST00000365329 160 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 RNU6-1032P-201ENST00000384100 107 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 RNY1P14-201ENST00000384426 108 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 Y_RNA.496-201ENST00000384444 101 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 Y_RNA.533-201ENST00000384596 114 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 RNA5SP252-201ENST00000391131 119 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSRP1Q08945 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.92□□□□□ -1.78
SSRP1Q08945 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.92□□□□□ -1.78
SSRP1Q08945 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.92□□□□□ -1.78
SSRP1Q08945 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.92□□□□□ -1.78
SSRP1Q08945 NUP35P1-201ENST00000422734 947 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 RPS15AP5-201ENST00000436276 388 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSRP1Q08945 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.92□□□□□ -1.78
SSRP1Q08945 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.92□□□□□ -1.78
SSRP1Q08945 HMGN1P10-201ENST00000474557 553 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 SNORA25.10-201ENST00000515926 124 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.92□□□□□ -1.78
SSRP1Q08945 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.92□□□□□ -1.78
SSRP1Q08945 AP000889.1-201ENST00000530968 660 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.92□□□□□ -1.78
SSRP1Q08945 AC116312.1-201ENST00000606841 314 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 AC006157.1-201ENST00000611750 366 ntBASIC3.92□□□□□ -1.78
SSRP1Q08945 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSRP1Q08945 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.91□□□□□ -1.78
SSRP1Q08945 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSRP1Q08945 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SSRP1Q08945 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
SSRP1Q08945 RNA5SP50-201ENST00000363731 107 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 RNA5SP387-201ENST00000364226 106 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.91□□□□□ -1.78
SSRP1Q08945 BTF3L4P2-201ENST00000392798 346 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 SNORA11.1-201ENST00000408133 129 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.91□□□□□ -1.78
SSRP1Q08945 AC245291.1-201ENST00000419501 328 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.91□□□□□ -1.78
SSRP1Q08945 MED28P2-201ENST00000475771 317 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 AC021205.2-201ENST00000480069 347 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 AC007458.1-201ENST00000542812 373 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.91□□□□□ -1.78
SSRP1Q08945 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.91□□□□□ -1.78
SSRP1Q08945 AC009163.5-201ENST00000575421 637 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.91□□□□□ -1.78
SSRP1Q08945 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.91□□□□□ -1.78
SSRP1Q08945 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.91□□□□□ -1.78
SSRP1Q08945 AC009318.2-201ENST00000610917 651 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 AC007485.1-201ENST00000616755 206 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 AC024581.2-201ENST00000619986 252 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 AC241585.2-209ENST00000638217 143 ntBASIC3.91□□□□□ -1.78
SSRP1Q08945 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSRP1Q08945 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSRP1Q08945 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SSRP1Q08945 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSRP1Q08945 SNORD50.1-201ENST00000362987 71 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 Y_RNA.123-201ENST00000363338 102 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 Y_RNA.145-201ENST00000363527 102 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 Y_RNA.364-201ENST00000365532 101 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 RNU6-784P-201ENST00000384330 106 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 Y_RNA.577-201ENST00000384794 101 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 Z98941.1-201ENST00000407764 100 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 AC023141.4-201ENST00000412031 328 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.9□□□□□ -1.79
SSRP1Q08945 AC074117.2-201ENST00000417130 397 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.9□□□□□ -1.79
SSRP1Q08945 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 AL161651.1-201ENST00000440882 223 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.9□□□□□ -1.79
SSRP1Q08945 GSTA11P-201ENST00000452866 669 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.9□□□□□ -1.79
SSRP1Q08945 ACA59.2-201ENST00000517061 156 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 MIR4474-201ENST00000579189 78 ntBASIC3.9□□□□□ -1.79
SSRP1Q08945 MIR3944-201ENST00000581277 108 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms