Protein–RNA interactions for Protein: Q06124

PTPN11, Tyrosine-protein phosphatase non-receptor type 11, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11Q06124 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN11Q06124 AL356535.1-201ENST00000440335 398 ntBASIC4.24□□□□□ -1.73
PTPN11Q06124 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN11Q06124 RNU1-103P-201ENST00000516502 125 ntBASIC4.24□□□□□ -1.73
PTPN11Q06124 RNU6-1012P-201ENST00000516606 109 ntBASIC4.24□□□□□ -1.73
PTPN11Q06124 RNA5SP468-201ENST00000516782 93 ntBASIC4.24□□□□□ -1.73
PTPN11Q06124 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPN11Q06124 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPN11Q06124 GNRHR2P1-201ENST00000555315 631 ntBASIC4.24□□□□□ -1.73
PTPN11Q06124 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.24□□□□□ -1.73
PTPN11Q06124 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN11Q06124 AC137590.2-201ENST00000619709 240 ntBASIC4.24□□□□□ -1.73
PTPN11Q06124 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.24□□□□□ -1.73
PTPN11Q06124 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPN11Q06124 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN11Q06124 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN11Q06124 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN11Q06124 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN11Q06124 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN11Q06124 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN11Q06124 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN11Q06124 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PTPN11Q06124 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPN11Q06124 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN11Q06124 FAM35BP-202ENST00000497389 3337 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 USP8P1-201ENST00000494673 3183 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 AL353743.1-202ENST00000431724 1695 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN11Q06124 AC090740.1-201ENST00000623193 2262 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN11Q06124 RNU6-50P-201ENST00000362356 103 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 SNORD27-201ENST00000363981 72 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 RNU6-1286P-201ENST00000383871 107 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 RNU6-338P-201ENST00000383888 105 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 MIR518D-201ENST00000385014 87 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 Y_RNA.581-201ENST00000391017 97 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN11Q06124 HMGN2P30-201ENST00000423237 256 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 NDUFB4P6-201ENST00000436819 366 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN11Q06124 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN11Q06124 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.23□□□□□ -1.73
PTPN11Q06124 SNORD105B-201ENST00000458770 79 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 RPL23AP75-201ENST00000491601 451 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 AC136932.1-201ENST00000574771 208 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN11Q06124 RPL23AP88-201ENST00000605759 454 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 AC240442.1-201ENST00000616055 283 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 MIR7975-201ENST00000619350 68 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 AC024581.2-201ENST00000619986 252 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 AC241585.2-209ENST00000638217 143 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN11Q06124 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN11Q06124 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN11Q06124 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.23□□□□□ -1.73
PTPN11Q06124 AC010733.2-201ENST00000589496 5702 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN11Q06124 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN11Q06124 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN11Q06124 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTPN11Q06124 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN11Q06124 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTPN11Q06124 SNORA31-201ENST00000362607 130 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 RNU6-778P-201ENST00000363269 103 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 SNORD74.4-201ENST00000364129 80 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 RNA5SP51-201ENST00000364750 119 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
PTPN11Q06124 RNU6-142P-201ENST00000384019 107 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 Y_RNA.555-201ENST00000384673 110 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 MIR215-201ENST00000384858 110 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 MIR493-201ENST00000385254 89 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 MIR888-201ENST00000401186 77 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 RNA5SP306-201ENST00000411087 107 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 ATP5A1P2-201ENST00000412323 255 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN11Q06124 MTND5P15-201ENST00000434246 349 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN11Q06124 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN11Q06124 AC009296.1-201ENST00000443146 155 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 AL353705.4-201ENST00000449661 238 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 RPS26P21-201ENST00000475397 348 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 GZMAP1-201ENST00000503054 631 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 VWA8P1-201ENST00000510889 176 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 AC022080.3-201ENST00000544433 482 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 AC091953.5-201ENST00000622919 233 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN11Q06124 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPN11Q06124 AP001148.1-201ENST00000624124 2359 ntBASIC4.22□□□□□ -1.73
PTPN11Q06124 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTPN11Q06124 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN11Q06124 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN11Q06124 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN11Q06124 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN11Q06124 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.73
PTPN11Q06124 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PTPN11Q06124 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN11Q06124 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN11Q06124 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN11Q06124 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms