Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC093899.1-201ENST00000457984 376 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.86□□□□□ -2.11
CCNA1P78396 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.86□□□□□ -2.11
CCNA1P78396 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.86□□□□□ -2.11
CCNA1P78396 MRPS36P3-201ENST00000519284 130 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 ARL2BPP2-201ENST00000550907 489 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 AC093249.1-201ENST00000567049 203 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.86□□□□□ -2.11
CCNA1P78396 MIR3146-201ENST00000580367 79 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.86□□□□□ -2.11
CCNA1P78396 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.86□□□□□ -2.11
CCNA1P78396 uc_338.5-201ENST00000611839 155 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 AC068787.1-201ENST00000623908 691 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 AC007671.2-201ENST00000637344 619 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 RBBP8P1-201ENST00000449447 1844 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 AC092104.1-201ENST00000497346 1441 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.85□□□□□ -2.11
CCNA1P78396 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.85□□□□□ -2.11
CCNA1P78396 AL391987.6-201ENST00000305671 199 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 RNU1-42P-201ENST00000364033 160 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 RNU6-60P-201ENST00000364792 103 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 RNU6-843P-201ENST00000384454 104 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 MIR186-201ENST00000384988 86 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 AC004965.1-201ENST00000413033 213 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 AC098592.1-201ENST00000419352 333 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 RPS27AP14-201ENST00000422868 454 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.85□□□□□ -2.11
CCNA1P78396 HMGB1P31-201ENST00000437242 427 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 AL606662.1-201ENST00000445763 553 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.85□□□□□ -2.11
CCNA1P78396 AL139824.2-201ENST00000458731 1095 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 AC132942.1-201ENST00000486753 483 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.85□□□□□ -2.11
CCNA1P78396 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.85□□□□□ -2.11
CCNA1P78396 MIR3198-2-201ENST00000577868 80 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.85□□□□□ -2.11
CCNA1P78396 BNIP3P30-201ENST00000601184 574 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 BX248123.2-201ENST00000606318 124 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 uc_338.12-201ENST00000616344 181 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 AL391262.2-201ENST00000622466 494 ntBASIC1.85□□□□□ -2.11
CCNA1P78396 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CCNA1P78396 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
CCNA1P78396 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CCNA1P78396 RNU6-1214P-201ENST00000363650 109 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 SNORA72.3-201ENST00000365074 132 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 SMIM11P1-201ENST00000369586 178 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
CCNA1P78396 RNU6-546P-201ENST00000383991 107 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 RNU6-190P-201ENST00000384154 102 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 MIR517C-201ENST00000385103 95 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.84□□□□□ -2.11
CCNA1P78396 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.84□□□□□ -2.11
CCNA1P78396 UBE2V1P4-201ENST00000425374 344 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.84□□□□□ -2.11
CCNA1P78396 AC118469.1-201ENST00000442943 488 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 SNRPFP4-201ENST00000456366 242 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 AC006026.2-201ENST00000457376 180 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 RNA5SP57-201ENST00000459463 123 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 HMGB1P30-201ENST00000492455 606 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
CCNA1P78396 RNU6-1092P-201ENST00000516955 87 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 RNU6-1003P-201ENST00000517099 105 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 AC022616.6-201ENST00000520479 119 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.84□□□□□ -2.11
CCNA1P78396 CYCSP27-201ENST00000527643 293 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.84□□□□□ -2.11
CCNA1P78396 ELOCP32-201ENST00000548625 324 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 ZNF519P3-201ENST00000557158 1032 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.84□□□□□ -2.11
CCNA1P78396 AL645939.4-201ENST00000604495 135 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 AC006338.1-201ENST00000618453 749 ntBASIC1.84□□□□□ -2.11
CCNA1P78396 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.84□□□□□ -2.11
CCNA1P78396 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCNA1P78396 RNU5F-6P-201ENST00000362979 116 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 SNORD115-3-201ENST00000363100 82 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 SNORA4.3-201ENST00000365564 137 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CCNA1P78396 MIR934-201ENST00000401241 83 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 RNU2-32P-201ENST00000411193 191 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 AL353777.1-201ENST00000425552 326 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.83□□□□□ -2.12
CCNA1P78396 AL451074.3-201ENST00000437709 472 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 RPL22P17-201ENST00000438729 315 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.83□□□□□ -2.12
CCNA1P78396 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.83□□□□□ -2.12
CCNA1P78396 MTND2P14-201ENST00000482139 351 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 RNU2-10P-201ENST00000516375 211 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 AC107934.1-201ENST00000522215 217 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 AP004607.1-201ENST00000524456 203 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 AP001372.4-201ENST00000524889 472 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 MTND4LP18-201ENST00000526864 291 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 AP003461.1-201ENST00000528866 78 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.83□□□□□ -2.12
CCNA1P78396 AC092325.1-201ENST00000566449 554 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 AC022254.1-201ENST00000567857 235 ntBASIC1.83□□□□□ -2.12
CCNA1P78396 CYP2C61P-201ENST00000604072 290 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms