Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC010733.2-201ENST00000589496 5702 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HERVK_113P62684 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HERVK_113P62684 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HERVK_113P62684 RNY1P16-201ENST00000363063 111 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 RNU6-238P-201ENST00000363313 106 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 Y_RNA.176-201ENST00000363815 109 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 RNU6-166P-201ENST00000384371 107 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HERVK_113P62684 SNORA40C-201ENST00000391285 128 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 AC092573.2-201ENST00000434546 243 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.85□□□□□ -1.79
HERVK_113P62684 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.85□□□□□ -1.79
HERVK_113P62684 U8.21-201ENST00000459536 136 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 AC010401.1-201ENST00000463867 348 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 RPL21P104-201ENST00000464143 478 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 AC109925.1-201ENST00000478069 331 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 RPS4XP13-201ENST00000483219 789 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.85□□□□□ -1.79
HERVK_113P62684 RNU6-635P-201ENST00000516651 102 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 MIR2276-201ENST00000516886 89 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 CPDP1-201ENST00000579660 283 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 LARP7P3-201ENST00000579888 337 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 AC136601.2-201ENST00000604356 474 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 AC099506.2-201ENST00000623074 221 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 AC006386.2-201ENST00000624491 75 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 AC012005.1-201ENST00000624575 75 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 AL606534.2-204ENST00000635008 178 ntBASIC3.85□□□□□ -1.79
HERVK_113P62684 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.85□□□□□ -1.79
HERVK_113P62684 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.84□□□□□ -1.79
HERVK_113P62684 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HERVK_113P62684 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.84□□□□□ -1.79
HERVK_113P62684 RNU6-50P-201ENST00000362356 103 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 Y_RNA.153-201ENST00000363615 91 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 U8.8-201ENST00000365399 135 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.84□□□□□ -1.79
HERVK_113P62684 Y_RNA.401-201ENST00000383965 117 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 Y_RNA.510-201ENST00000384511 114 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 RNU6-1197P-201ENST00000391183 107 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.84□□□□□ -1.79
HERVK_113P62684 RNU6-1156P-201ENST00000410365 100 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 NUP35P1-201ENST00000422734 947 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 BX679664.1-201ENST00000434429 253 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 SNRPEP9-201ENST00000436794 238 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 RPS4XP2-201ENST00000458402 793 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 Y_RNA.721-201ENST00000517207 102 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.84□□□□□ -1.79
HERVK_113P62684 HIGD1AP1-201ENST00000550979 275 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 7SK.7-201ENST00000603504 247 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 SNORD58B-201ENST00000607313 66 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.84□□□□□ -1.79
HERVK_113P62684 HMGB1P24-202ENST00000615653 685 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.84□□□□□ -1.79
HERVK_113P62684 AL359693.1-201ENST00000614959 2407 ntBASIC3.84□□□□□ -1.8
HERVK_113P62684 ZNF72P-201ENST00000425869 1908 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HERVK_113P62684 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
HERVK_113P62684 MIR422A-201ENST00000362286 90 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 RNY3P11-201ENST00000364153 102 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 Y_RNA.452-201ENST00000384202 108 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 RNU6-505P-201ENST00000384427 107 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 Y_RNA.500-201ENST00000384466 111 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 RNU6-140P-201ENST00000384566 108 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 Y_RNA.533-201ENST00000384596 114 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 Y_RNA.577-201ENST00000384794 101 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 RNA5SP129-201ENST00000410276 118 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.83□□□□□ -1.8
HERVK_113P62684 COTL1P1-201ENST00000422309 375 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 HMGB1P12-201ENST00000438594 598 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HERVK_113P62684 Y_RNA.687-201ENST00000516558 91 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.83□□□□□ -1.8
HERVK_113P62684 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.83□□□□□ -1.8
HERVK_113P62684 AC138305.3-201ENST00000624988 240 ntBASIC3.83□□□□□ -1.8
HERVK_113P62684 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HERVK_113P62684 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.83□□□□□ -1.8
HERVK_113P62684 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HERVK_113P62684 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HERVK_113P62684 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
HERVK_113P62684 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HERVK_113P62684 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HERVK_113P62684 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HERVK_113P62684 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HERVK_113P62684 MIR1289-1-201ENST00000408836 144 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 AC098614.2-201ENST00000426040 255 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 MTND3P9-201ENST00000429526 346 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 AL512844.2-201ENST00000433990 593 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.82□□□□□ -1.8
HERVK_113P62684 HMGN2P7-201ENST00000456186 273 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 U8.20-201ENST00000459445 131 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 RNU7-169P-201ENST00000459456 61 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 UBE2DNL-203ENST00000474922 222 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 AC114801.2-201ENST00000503825 781 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 RPL23AP94-201ENST00000512518 302 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.82□□□□□ -1.8
HERVK_113P62684 AC004817.2-201ENST00000561794 651 ntBASIC3.82□□□□□ -1.8
HERVK_113P62684 ZNF192P1-203ENST00000565888 810 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms