Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 Y_RNA.5-201ENST00000362334 102 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 SNORD14B-201ENST00000364533 90 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 RNU6-1040P-201ENST00000383974 107 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 SNORA9-201ENST00000384215 133 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 RNU6-842P-201ENST00000384269 107 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 SNORA1.3-201ENST00000384676 136 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 MIR491-201ENST00000384877 84 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 RNU2-68P-201ENST00000410878 191 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 Y_RNA.623-201ENST00000411128 95 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 AC113618.1-201ENST00000416747 285 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 ATG3P1-201ENST00000419507 911 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.81□□□□□ -1.96
SEC61A1P61619 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.81□□□□□ -1.96
SEC61A1P61619 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 RPL23AP83-201ENST00000434984 473 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.81□□□□□ -1.96
SEC61A1P61619 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.81□□□□□ -1.96
SEC61A1P61619 RPS3AP12-201ENST00000443616 753 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 AC115115.1-201ENST00000449927 248 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.81□□□□□ -1.96
SEC61A1P61619 AC113155.1-201ENST00000511141 769 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 SNORA70.24-201ENST00000517233 118 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 AC005476.1-201ENST00000554427 397 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 MIR3200-201ENST00000580767 85 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 MIR3609-201ENST00000582661 80 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.81□□□□□ -1.96
SEC61A1P61619 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.81□□□□□ -1.96
SEC61A1P61619 AL162713.1-201ENST00000604480 262 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 AC007938.3-201ENST00000604965 623 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 AL162730.1-201ENST00000605734 292 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 AC011890.2-201ENST00000613393 294 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 MTND5P30-201ENST00000452896 1731 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.81□□□□□ -1.96
SEC61A1P61619 AC073346.2-201ENST00000624724 2058 ntBASIC2.81□□□□□ -1.96
SEC61A1P61619 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.81□□□□□ -1.96
SEC61A1P61619 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SEC61A1P61619 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SEC61A1P61619 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.81□□□□□ -1.96
SEC61A1P61619 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SEC61A1P61619 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.8□□□□□ -1.96
SEC61A1P61619 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SEC61A1P61619 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SEC61A1P61619 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SEC61A1P61619 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SEC61A1P61619 Y_RNA.48-201ENST00000362710 103 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 RNU6-166P-201ENST00000384371 107 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 RNU6-790P-201ENST00000384479 105 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 RNU6-1160P-201ENST00000384546 104 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 RNU6-325P-201ENST00000411132 105 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 RNU6-293P-201ENST00000411259 106 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.8□□□□□ -1.96
SEC61A1P61619 AL645568.3-201ENST00000433683 316 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 RPL23AP50-201ENST00000434149 455 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 SNRPEP4-201ENST00000435815 279 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.8□□□□□ -1.96
SEC61A1P61619 PCMTD1P1-201ENST00000455560 355 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 SNORD5.1-201ENST00000458800 75 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 PTP4A1P4-201ENST00000512479 322 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 RN7SKP295-201ENST00000517264 153 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 TRAV32-201ENST00000553993 340 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.8□□□□□ -1.96
SEC61A1P61619 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.8□□□□□ -1.96
SEC61A1P61619 AC109446.1-201ENST00000566172 220 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SEC61A1P61619 BNIP3P16-201ENST00000589779 534 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 AC008737.2-201ENST00000599446 118 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.8□□□□□ -1.96
SEC61A1P61619 CYP2C61P-201ENST00000604072 290 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 AC007485.1-201ENST00000616755 206 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 AC091953.5-201ENST00000622919 233 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 AC073308.1-201ENST00000623696 305 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 MIR3651-201ENST00000630427 90 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.8□□□□□ -1.96
SEC61A1P61619 U6.99-201ENST00000637524 83 ntBASIC2.8□□□□□ -1.96
SEC61A1P61619 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SEC61A1P61619 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SEC61A1P61619 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SEC61A1P61619 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.8□□□□□ -1.96
SEC61A1P61619 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.79□□□□□ -1.96
SEC61A1P61619 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.79□□□□□ -1.96
SEC61A1P61619 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SEC61A1P61619 RNU6-1115P-201ENST00000362490 106 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 Y_RNA.28-201ENST00000362554 111 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 RNA5SP295-201ENST00000362655 121 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 Y_RNA.148-201ENST00000363557 117 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 RNU6-827P-201ENST00000365553 106 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 Y_RNA.463-201ENST00000384271 102 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 SNORA40C-201ENST00000391285 128 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 AL030996.1-201ENST00000411430 235 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.79□□□□□ -1.96
SEC61A1P61619 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.79□□□□□ -1.96
SEC61A1P61619 CST9LP2-201ENST00000437612 320 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 AL031183.1-201ENST00000457667 207 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 AC092798.1-201ENST00000458542 409 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.79□□□□□ -1.96
SEC61A1P61619 RPL32P34-201ENST00000486380 400 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 RPL21P13-201ENST00000488305 481 ntBASIC2.79□□□□□ -1.96
SEC61A1P61619 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.79□□□□□ -1.96
SEC61A1P61619 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms