Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AL353752.1-201ENST00000454946 260 ntBASIC1.09□□□□□ -2.23
CXCR4P61073 AC116353.3-201ENST00000511215 249 ntBASIC1.09□□□□□ -2.23
CXCR4P61073 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.09□□□□□ -2.23
CXCR4P61073 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.09□□□□□ -2.23
CXCR4P61073 SUB1P4-201ENST00000566062 339 ntBASIC1.09□□□□□ -2.23
CXCR4P61073 AC137800.2-201ENST00000574375 120 ntBASIC1.09□□□□□ -2.23
CXCR4P61073 AL158827.2-201ENST00000602494 330 ntBASIC1.09□□□□□ -2.23
CXCR4P61073 AL158211.2-201ENST00000607282 395 ntBASIC1.09□□□□□ -2.23
CXCR4P61073 MIR15A-201ENST00000607334 83 ntBASIC1.09□□□□□ -2.23
CXCR4P61073 MIR1248-201ENST00000629190 106 ntBASIC1.09□□□□□ -2.23
CXCR4P61073 AL691447.3-201ENST00000635020 330 ntBASIC1.09□□□□□ -2.23
CXCR4P61073 AC092104.1-201ENST00000497346 1441 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CXCR4P61073 MIR412-201ENST00000362142 91 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 snoU2_19.1-201ENST00000362361 80 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 RNU6-271P-201ENST00000363858 105 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 SNORD14B-201ENST00000364533 90 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 RNU6-769P-201ENST00000384407 104 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 SNORD116-20-201ENST00000384529 92 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CXCR4P61073 CST2P1-201ENST00000425770 87 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 TXNL1P1-201ENST00000429528 554 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 TOMM22P2-201ENST00000430735 237 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 AL627311.1-201ENST00000431514 115 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 USP9YP17-201ENST00000444617 696 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 AC087477.1-201ENST00000465747 340 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 RPS26P55-201ENST00000471178 356 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 RPL30P7-201ENST00000479312 323 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 YWHAEP4-201ENST00000505390 198 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 RNU6-991P-201ENST00000516168 107 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.08□□□□□ -2.24
CXCR4P61073 AP003122.4-201ENST00000530980 758 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.08□□□□□ -2.24
CXCR4P61073 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CXCR4P61073 MIR3169-201ENST00000578032 83 ntBASIC1.08□□□□□ -2.24
CXCR4P61073 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.08□□□□□ -2.24
CXCR4P61073 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CXCR4P61073 RNU6-414P-201ENST00000363705 104 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 Y_RNA.192-201ENST00000363977 102 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 RNY3P13-201ENST00000365542 102 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 RNU6-190P-201ENST00000384154 102 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 SNORA70.7-201ENST00000384159 133 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 ERHP2-201ENST00000402323 299 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 MIR1267-201ENST00000408723 78 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 Y_RNA.597-201ENST00000410463 100 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 AL365400.1-201ENST00000431854 640 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 AC010095.1-201ENST00000443543 144 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.07□□□□□ -2.24
CXCR4P61073 DUXAP8-207ENST00000456786 622 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.07□□□□□ -2.24
CXCR4P61073 AC119751.4-201ENST00000507498 357 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 RNU6-1092P-201ENST00000516955 87 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.07□□□□□ -2.24
CXCR4P61073 AC068587.4-201ENST00000533893 186 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.07□□□□□ -2.24
CXCR4P61073 RAB11AP2-201ENST00000545905 639 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 MIR544B-201ENST00000582372 78 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 AC005786.1-201ENST00000588553 154 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 AL606834.3-201ENST00000602615 496 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 AC078795.2-201ENST00000602835 1252 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 BCRP9-201ENST00000605312 388 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 PART1_2.1-201ENST00000612397 250 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 AC006386.1-201ENST00000619436 415 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CXCR4P61073 AC024940.5-201ENST00000622889 474 ntBASIC1.07□□□□□ -2.24
CXCR4P61073 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.07□□□□□ -2.24
CXCR4P61073 RNU5E-6P-201ENST00000365574 115 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 RNU6-946P-201ENST00000383878 107 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 RNU6-723P-201ENST00000383973 107 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 Y_RNA.465-201ENST00000384293 102 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 AL136310.1-201ENST00000404926 654 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 AC092809.3-201ENST00000415453 231 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.06□□□□□ -2.24
CXCR4P61073 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.06□□□□□ -2.24
CXCR4P61073 RPS15AP10-201ENST00000432472 382 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.06□□□□□ -2.24
CXCR4P61073 CALM1P1-201ENST00000442082 433 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 NDUFB1P2-201ENST00000449477 176 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 RPL30P1-201ENST00000488676 339 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.06□□□□□ -2.24
CXCR4P61073 HMGN1P13-201ENST00000505795 138 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.06□□□□□ -2.24
CXCR4P61073 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CXCR4P61073 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.06□□□□□ -2.24
CXCR4P61073 AL356057.1-201ENST00000533798 831 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CXCR4P61073 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.06□□□□□ -2.24
CXCR4P61073 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.06□□□□□ -2.24
CXCR4P61073 MTND4LP25-201ENST00000570218 163 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 MIR3146-201ENST00000580367 79 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 AC022022.2-201ENST00000602989 360 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 AL022154.1-201ENST00000604698 785 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 AC091965.4-201ENST00000607691 587 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 AL355816.2-201ENST00000610049 647 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 AC063943.3-201ENST00000615562 356 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 AC241585.2-209ENST00000638217 143 ntBASIC1.06□□□□□ -2.24
CXCR4P61073 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.06□□□□□ -2.24
CXCR4P61073 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms