Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC011471.1-201ENST00000585766 187 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 AC060766.3-201ENST00000591442 263 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 U6.106-201ENST00000636360 105 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ERVFC1P60507 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
ERVFC1P60507 NCAPGP1-201ENST00000505112 1814 ntBASIC4.04□□□□□ -1.76
ERVFC1P60507 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.04□□□□□ -1.76
ERVFC1P60507 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ERVFC1P60507 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ERVFC1P60507 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ERVFC1P60507 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
ERVFC1P60507 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ERVFC1P60507 AC027290.2-201ENST00000623210 18662 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
ERVFC1P60507 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ERVFC1P60507 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.03□□□□□ -1.76
ERVFC1P60507 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
ERVFC1P60507 SNORD74.4-201ENST00000364129 80 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 RNU2-20P-201ENST00000410425 191 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.03□□□□□ -1.76
ERVFC1P60507 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.03□□□□□ -1.76
ERVFC1P60507 AL358453.1-201ENST00000422522 250 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 RPL21P40-201ENST00000428586 483 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 MTCO1P5-201ENST00000433573 344 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.03□□□□□ -1.76
ERVFC1P60507 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.03□□□□□ -1.76
ERVFC1P60507 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.03□□□□□ -1.76
ERVFC1P60507 AC078817.1-201ENST00000492623 435 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 AC074198.2-201ENST00000508153 258 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 RNA5SP164-201ENST00000516533 110 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 AC002545.1-201ENST00000592511 181 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 AC004832.4-201ENST00000608952 331 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 AL590240.4-201ENST00000616908 390 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.03□□□□□ -1.76
ERVFC1P60507 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
ERVFC1P60507 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
ERVFC1P60507 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ERVFC1P60507 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
ERVFC1P60507 ZNF826P-207ENST00000622273 1910 ntBASIC4.03□□□□□ -1.76
ERVFC1P60507 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ERVFC1P60507 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ERVFC1P60507 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ERVFC1P60507 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ERVFC1P60507 LINC02471-203ENST00000641941 4752 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 RNU6-1020P-201ENST00000363684 107 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 SNORD50B-201ENST00000364995 70 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 MIR514A1-201ENST00000385133 98 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ERVFC1P60507 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 ATP5A1P2-201ENST00000412323 255 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 TOMM20P4-201ENST00000427861 435 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.02□□□□□ -1.77
ERVFC1P60507 HMGN2P21-201ENST00000447764 270 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 BX510359.1-201ENST00000456973 237 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 RPL21P104-201ENST00000464143 478 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 RN7SL585P-201ENST00000470538 280 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 RPS20P22-201ENST00000473700 357 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.02□□□□□ -1.77
ERVFC1P60507 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.02□□□□□ -1.77
ERVFC1P60507 RNU7-200P-201ENST00000516105 62 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.02□□□□□ -1.77
ERVFC1P60507 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.02□□□□□ -1.77
ERVFC1P60507 AC023824.2-201ENST00000566185 400 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.02□□□□□ -1.77
ERVFC1P60507 MIR4282-201ENST00000583613 67 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 AC011921.3-201ENST00000605540 361 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 uc_338.32-201ENST00000615087 172 ntBASIC4.02□□□□□ -1.77
ERVFC1P60507 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.02□□□□□ -1.77
ERVFC1P60507 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.02□□□□□ -1.77
ERVFC1P60507 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ERVFC1P60507 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.02□□□□□ -1.77
ERVFC1P60507 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ERVFC1P60507 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ERVFC1P60507 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
ERVFC1P60507 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ERVFC1P60507 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
ERVFC1P60507 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.01□□□□□ -1.77
ERVFC1P60507 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.01□□□□□ -1.77
ERVFC1P60507 RNA5SP267-201ENST00000364893 126 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 Y_RNA.292-201ENST00000364904 97 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 RNU4-9P-201ENST00000364951 139 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 RNU6-1074P-201ENST00000383995 104 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ERVFC1P60507 SNORA53-201ENST00000391141 249 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 SNORA11.2-201ENST00000408318 127 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.01□□□□□ -1.77
ERVFC1P60507 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.01□□□□□ -1.77
ERVFC1P60507 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.01□□□□□ -1.77
ERVFC1P60507 RPS26P21-201ENST00000475397 348 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 AC109925.1-201ENST00000478069 331 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 Y_RNA.662-201ENST00000516028 97 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 RNA5SP309-201ENST00000516670 106 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.01□□□□□ -1.77
ERVFC1P60507 SNORD84-203ENST00000584275 78 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 AL162424.1-201ENST00000602325 221 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 AL773545.4-201ENST00000637262 310 ntBASIC4.01□□□□□ -1.77
ERVFC1P60507 AL513478.4-201ENST00000641636 310 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms