Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 NDUFB1P2-201ENST00000449477 176 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 AC112204.1-201ENST00000502591 103 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 UBE2V1P12-201ENST00000503954 474 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.55□□□□□ -2.16
CLDN18P56856 AF131216.2-201ENST00000512316 564 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 RN7SKP256-201ENST00000517201 314 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.55□□□□□ -2.16
CLDN18P56856 MTND4P33-201ENST00000556706 766 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 AC090888.2-201ENST00000559765 1144 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 AP002360.4-201ENST00000606980 481 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 AC063943.3-201ENST00000615562 356 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 AL132822.1-201ENST00000617063 513 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 AC010608.3-201ENST00000625048 527 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
CLDN18P56856 AC233981.2-201ENST00000611524 1614 ntBASIC1.55□□□□□ -2.16
CLDN18P56856 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.55□□□□□ -2.16
CLDN18P56856 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN18P56856 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
CLDN18P56856 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CLDN18P56856 Y_RNA.40-201ENST00000362645 93 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 SNORD14B-201ENST00000364533 90 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 RNA5SP213-201ENST00000391031 106 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 MRPL42P2-201ENST00000403169 426 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.54□□□□□ -2.16
CLDN18P56856 MTCO2P23-201ENST00000425216 680 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 IFNA20P-201ENST00000436840 528 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 AL009048.1-201ENST00000450437 298 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN18P56856 AP001025.1-201ENST00000486139 332 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.54□□□□□ -2.16
CLDN18P56856 HSPE1P23-201ENST00000509838 286 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 AC008834.1-201ENST00000511612 175 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 RNU6-123P-201ENST00000516163 102 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 RNA5SP337-201ENST00000517007 109 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 SNORA44.1-201ENST00000517031 108 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 AL353778.1-201ENST00000603149 408 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.54□□□□□ -2.16
CLDN18P56856 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 AC245060.5-201ENST00000610778 3293 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 ZNF72P-201ENST00000425869 1908 ntBASIC1.54□□□□□ -2.16
CLDN18P56856 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 Y_RNA.97-201ENST00000363094 102 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 RNU4-42P-201ENST00000364738 142 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 RNA5SP190-201ENST00000365222 118 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 RNU6-533P-201ENST00000384144 107 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 RNU6-1200P-201ENST00000384162 107 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 C1DP2-201ENST00000418167 426 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN18P56856 USP9YP18-201ENST00000425912 695 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 AL354941.1-201ENST00000438600 464 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.53□□□□□ -2.16
CLDN18P56856 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN18P56856 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN18P56856 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.53□□□□□ -2.16
CLDN18P56856 SNORD13-201ENST00000459299 104 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CLDN18P56856 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN18P56856 AC108078.2-201ENST00000510750 236 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 RNU5A-4P-201ENST00000516588 111 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN18P56856 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.53□□□□□ -2.16
CLDN18P56856 ZNF519P3-201ENST00000557158 1032 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 MIR3618-201ENST00000580330 88 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 MIR4285-201ENST00000581001 85 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 AC078795.2-201ENST00000602835 1252 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 AC012409.4-201ENST00000612923 249 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN18P56856 AC026585.1-201ENST00000619582 524 ntBASIC1.53□□□□□ -2.16
CLDN18P56856 RNU6-1164P-201ENST00000364428 107 ntBASIC1.52□□□□□ -2.17
CLDN18P56856 Y_RNA.597-201ENST00000410463 100 ntBASIC1.52□□□□□ -2.17
CLDN18P56856 AC114491.1-201ENST00000416095 246 ntBASIC1.52□□□□□ -2.17
CLDN18P56856 MTCYBP5-201ENST00000423752 1135 ntBASIC1.52□□□□□ -2.17
CLDN18P56856 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.52□□□□□ -2.17
CLDN18P56856 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.52□□□□□ -2.17
CLDN18P56856 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.52□□□□□ -2.17
CLDN18P56856 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.52□□□□□ -2.17
CLDN18P56856 SNORA43.2-201ENST00000516652 128 ntBASIC1.52□□□□□ -2.17
CLDN18P56856 RN7SKP219-201ENST00000516825 296 ntBASIC1.52□□□□□ -2.17
CLDN18P56856 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.52□□□□□ -2.17
CLDN18P56856 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.52□□□□□ -2.17
CLDN18P56856 BNIP3P6-201ENST00000549284 499 ntBASIC1.52□□□□□ -2.17
CLDN18P56856 AC104581.2-201ENST00000572227 430 ntBASIC1.52□□□□□ -2.17
CLDN18P56856 AC010928.2-201ENST00000588017 287 ntBASIC1.52□□□□□ -2.17
CLDN18P56856 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.52□□□□□ -2.17
CLDN18P56856 MIR502-201ENST00000606349 86 ntBASIC1.52□□□□□ -2.17
CLDN18P56856 AL139286.2-201ENST00000606838 396 ntBASIC1.52□□□□□ -2.17
CLDN18P56856 AC103810.8-201ENST00000607347 118 ntBASIC1.52□□□□□ -2.17
CLDN18P56856 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.52□□□□□ -2.17
CLDN18P56856 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
CLDN18P56856 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLDN18P56856 CR769776.1-201ENST00000441254 787 ntBASIC1.51□□□□□ -2.17
CLDN18P56856 AL353752.1-201ENST00000454946 260 ntBASIC1.51□□□□□ -2.17
CLDN18P56856 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN18P56856 AC087884.1-201ENST00000469738 328 ntBASIC1.51□□□□□ -2.17
CLDN18P56856 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.51□□□□□ -2.17
CLDN18P56856 RPL30P6-201ENST00000475925 342 ntBASIC1.51□□□□□ -2.17
CLDN18P56856 AC010587.1-201ENST00000505809 469 ntBASIC1.51□□□□□ -2.17
CLDN18P56856 MTND2P33-201ENST00000506452 1031 ntBASIC1.51□□□□□ -2.17
CLDN18P56856 AC093259.1-201ENST00000509755 300 ntBASIC1.51□□□□□ -2.17
CLDN18P56856 RNU6-991P-201ENST00000516168 107 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms