Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 U6.99-201ENST00000637524 83 ntBASIC2.36□□□□□ -2.03
PEX3P56589 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.35□□□□□ -2.03
PEX3P56589 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PEX3P56589 RNU6-1322P-201ENST00000364309 107 ntBASIC2.35□□□□□ -2.03
PEX3P56589 Y_RNA.255-201ENST00000364581 97 ntBASIC2.35□□□□□ -2.03
PEX3P56589 RNU6-898P-201ENST00000365627 104 ntBASIC2.35□□□□□ -2.03
PEX3P56589 SNORA16.2-201ENST00000390991 127 ntBASIC2.35□□□□□ -2.03
PEX3P56589 CIR1P3-201ENST00000405137 479 ntBASIC2.35□□□□□ -2.03
PEX3P56589 RNU6-648P-201ENST00000410190 107 ntBASIC2.35□□□□□ -2.03
PEX3P56589 RNU6-193P-201ENST00000410977 107 ntBASIC2.35□□□□□ -2.03
PEX3P56589 RN7SKP192-201ENST00000411291 327 ntBASIC2.35□□□□□ -2.03
PEX3P56589 RNA5SP111-201ENST00000411386 101 ntBASIC2.35□□□□□ -2.03
PEX3P56589 AF274854.1-201ENST00000413236 615 ntBASIC2.35□□□□□ -2.03
PEX3P56589 USP9YP6-201ENST00000413550 854 ntBASIC2.35□□□□□ -2.03
PEX3P56589 RPL21P90-201ENST00000415692 466 ntBASIC2.35□□□□□ -2.03
PEX3P56589 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.35□□□□□ -2.03
PEX3P56589 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.35□□□□□ -2.03
PEX3P56589 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.35□□□□□ -2.03
PEX3P56589 AC007560.1-201ENST00000426912 237 ntBASIC2.35□□□□□ -2.03
PEX3P56589 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.35□□□□□ -2.03
PEX3P56589 RPS15AP27-201ENST00000449183 343 ntBASIC2.35□□□□□ -2.03
PEX3P56589 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.35□□□□□ -2.03
PEX3P56589 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.35□□□□□ -2.03
PEX3P56589 CCDC34P1-201ENST00000507441 517 ntBASIC2.35□□□□□ -2.03
PEX3P56589 MTND3P25-201ENST00000509243 135 ntBASIC2.35□□□□□ -2.03
PEX3P56589 AC104136.1-201ENST00000512969 394 ntBASIC2.35□□□□□ -2.03
PEX3P56589 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.35□□□□□ -2.03
PEX3P56589 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.35□□□□□ -2.03
PEX3P56589 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.35□□□□□ -2.03
PEX3P56589 LINC00933-203ENST00000559812 219 ntBASIC2.35□□□□□ -2.03
PEX3P56589 HMGB1P33-201ENST00000563485 527 ntBASIC2.35□□□□□ -2.03
PEX3P56589 AL021997.1-201ENST00000605757 193 ntBASIC2.35□□□□□ -2.03
PEX3P56589 AC093788.1-201ENST00000609356 927 ntBASIC2.35□□□□□ -2.03
PEX3P56589 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.35□□□□□ -2.03
PEX3P56589 UCA1.1-201ENST00000620952 75 ntBASIC2.35□□□□□ -2.03
PEX3P56589 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.35□□□□□ -2.03
PEX3P56589 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
PEX3P56589 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PEX3P56589 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PEX3P56589 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PEX3P56589 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PEX3P56589 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
PEX3P56589 SNORA68.1-201ENST00000364537 132 ntBASIC2.34□□□□□ -2.03
PEX3P56589 RNU6-45P-201ENST00000384471 107 ntBASIC2.34□□□□□ -2.03
PEX3P56589 RNU6-1179P-201ENST00000384667 107 ntBASIC2.34□□□□□ -2.03
PEX3P56589 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PEX3P56589 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.34□□□□□ -2.03
PEX3P56589 AC016831.2-201ENST00000417179 352 ntBASIC2.34□□□□□ -2.03
PEX3P56589 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.34□□□□□ -2.03
PEX3P56589 AL358075.3-201ENST00000426289 226 ntBASIC2.34□□□□□ -2.03
PEX3P56589 RNU6-261P-201ENST00000459506 102 ntBASIC2.34□□□□□ -2.03
PEX3P56589 AC104435.1-201ENST00000483483 166 ntBASIC2.34□□□□□ -2.03
PEX3P56589 RPS29P21-201ENST00000496272 170 ntBASIC2.34□□□□□ -2.03
PEX3P56589 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.34□□□□□ -2.03
PEX3P56589 RNU2-69P-201ENST00000516061 100 ntBASIC2.34□□□□□ -2.03
PEX3P56589 SCARNA17.1-201ENST00000516211 143 ntBASIC2.34□□□□□ -2.03
PEX3P56589 SCARNA17.2-201ENST00000516334 143 ntBASIC2.34□□□□□ -2.03
PEX3P56589 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.34□□□□□ -2.03
PEX3P56589 AL137161.1-201ENST00000532231 390 ntBASIC2.34□□□□□ -2.03
PEX3P56589 AL138976.2-201ENST00000563989 694 ntBASIC2.34□□□□□ -2.03
PEX3P56589 MIR4648-201ENST00000580107 72 ntBASIC2.34□□□□□ -2.03
PEX3P56589 MIR3945-201ENST00000581853 98 ntBASIC2.34□□□□□ -2.03
PEX3P56589 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.34□□□□□ -2.03
PEX3P56589 AC087045.1-201ENST00000605856 382 ntBASIC2.34□□□□□ -2.03
PEX3P56589 SCARNA17.4-201ENST00000614296 143 ntBASIC2.34□□□□□ -2.03
PEX3P56589 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PEX3P56589 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
PEX3P56589 RNU6-942P-201ENST00000363002 107 ntBASIC2.33□□□□□ -2.04
PEX3P56589 RNU6-1085P-201ENST00000363576 107 ntBASIC2.33□□□□□ -2.04
PEX3P56589 Y_RNA.399-201ENST00000383955 105 ntBASIC2.33□□□□□ -2.04
PEX3P56589 RNU6-72P-201ENST00000384285 79 ntBASIC2.33□□□□□ -2.04
PEX3P56589 Y_RNA.505-201ENST00000384489 102 ntBASIC2.33□□□□□ -2.04
PEX3P56589 MIR181A1-201ENST00000385026 110 ntBASIC2.33□□□□□ -2.04
PEX3P56589 RNA5SP354-201ENST00000391247 136 ntBASIC2.33□□□□□ -2.04
PEX3P56589 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.33□□□□□ -2.04
PEX3P56589 C8orf59P1-201ENST00000429930 303 ntBASIC2.33□□□□□ -2.04
PEX3P56589 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.33□□□□□ -2.04
PEX3P56589 Z98742.2-201ENST00000431564 187 ntBASIC2.33□□□□□ -2.04
PEX3P56589 RPL7P54-201ENST00000438336 674 ntBASIC2.33□□□□□ -2.04
PEX3P56589 AL161651.1-201ENST00000440882 223 ntBASIC2.33□□□□□ -2.04
PEX3P56589 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.33□□□□□ -2.04
PEX3P56589 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.33□□□□□ -2.04
PEX3P56589 AC092001.1-201ENST00000453012 261 ntBASIC2.33□□□□□ -2.04
PEX3P56589 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.33□□□□□ -2.04
PEX3P56589 SRRM1P2-201ENST00000464531 1192 ntBASIC2.33□□□□□ -2.04
PEX3P56589 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.33□□□□□ -2.04
PEX3P56589 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.33□□□□□ -2.04
PEX3P56589 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.33□□□□□ -2.04
PEX3P56589 SNORA31.6-201ENST00000516241 130 ntBASIC2.33□□□□□ -2.04
PEX3P56589 SCARNA11.3-201ENST00000517276 130 ntBASIC2.33□□□□□ -2.04
PEX3P56589 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.33□□□□□ -2.04
PEX3P56589 AL121821.2-201ENST00000556081 394 ntBASIC2.33□□□□□ -2.04
PEX3P56589 AC092325.1-201ENST00000566449 554 ntBASIC2.33□□□□□ -2.04
PEX3P56589 AC025678.1-201ENST00000567861 338 ntBASIC2.33□□□□□ -2.04
PEX3P56589 AC005498.1-201ENST00000592125 465 ntBASIC2.33□□□□□ -2.04
PEX3P56589 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.33□□□□□ -2.04
PEX3P56589 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.33□□□□□ -2.04
PEX3P56589 AL354950.2-201ENST00000617939 290 ntBASIC2.33□□□□□ -2.04
PEX3P56589 MIR3199-2-201ENST00000636243 86 ntBASIC2.33□□□□□ -2.04
PEX3P56589 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms