Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNA5SP154-201ENST00000516193 111 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 IGKV2-23-201ENST00000518729 323 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.65□□□□□ -1.83
GFRA1P56159 AC105137.2-201ENST00000569073 466 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
GFRA1P56159 AC091152.3-201ENST00000604227 325 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 MIR6868-201ENST00000611215 58 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 AC240442.1-201ENST00000616055 283 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.65□□□□□ -1.83
GFRA1P56159 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
GFRA1P56159 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.65□□□□□ -1.83
GFRA1P56159 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
GFRA1P56159 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
GFRA1P56159 AC010680.1-201ENST00000590024 3590 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 AL136164.4-201ENST00000625013 2135 ntBASIC3.65□□□□□ -1.83
GFRA1P56159 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GFRA1P56159 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
GFRA1P56159 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.64□□□□□ -1.83
GFRA1P56159 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
GFRA1P56159 LINC02555-201ENST00000563933 1951 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GFRA1P56159 SNORA36A-201ENST00000384221 132 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 U8.10-201ENST00000384260 133 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 Y_RNA.552-201ENST00000384665 112 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 AC004552.1-201ENST00000419089 348 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 HLA-N-201ENST00000437516 135 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 RPS26P3-201ENST00000470205 348 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 RN7SL585P-201ENST00000470538 280 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 AC090543.2-201ENST00000483963 348 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 AC004057.1-201ENST00000485827 348 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 IFITM8P-201ENST00000522529 394 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.64□□□□□ -1.83
GFRA1P56159 AC027288.2-201ENST00000553028 243 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.64□□□□□ -1.83
GFRA1P56159 MIR4659A-201ENST00000580269 81 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 MIR4286-201ENST00000580651 93 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.64□□□□□ -1.83
GFRA1P56159 AL020997.2-201ENST00000602607 184 ntBASIC3.64□□□□□ -1.83
GFRA1P56159 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.64□□□□□ -1.83
GFRA1P56159 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.64□□□□□ -1.83
GFRA1P56159 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.64□□□□□ -1.83
GFRA1P56159 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.64□□□□□ -1.83
GFRA1P56159 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GFRA1P56159 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.64□□□□□ -1.83
GFRA1P56159 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GFRA1P56159 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GFRA1P56159 AC016588.2-201ENST00000632484 3021 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
GFRA1P56159 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GFRA1P56159 OTUD4P1-201ENST00000237841 3067 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GFRA1P56159 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GFRA1P56159 RNU6-1285P-201ENST00000363480 105 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 SNORD35B-201ENST00000363660 87 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 Y_RNA.257-201ENST00000364596 102 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 SNORA37-201ENST00000384504 129 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 MIR93-201ENST00000385024 80 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 MIR147B-201ENST00000390185 80 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 SNORA26.3-201ENST00000391119 136 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 EI24P2-201ENST00000397776 1076 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 RPL23AP48-201ENST00000406913 488 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 RNU2-25P-201ENST00000411041 191 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 AC096649.2-201ENST00000416186 393 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 AL691449.1-201ENST00000426570 421 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 AL591419.1-201ENST00000427423 339 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 AL353748.1-201ENST00000440753 474 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 HMGN2P7-201ENST00000456186 273 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 RN7SL271P-201ENST00000487601 295 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.63□□□□□ -1.83
GFRA1P56159 RNU5B-3P-201ENST00000516601 115 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 RNU6-567P-201ENST00000516746 107 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.63□□□□□ -1.83
GFRA1P56159 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.63□□□□□ -1.83
GFRA1P56159 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.63□□□□□ -1.83
GFRA1P56159 AC073410.2-201ENST00000603240 332 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 RNU6-91P-201ENST00000607774 107 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 AC012531.5-201ENST00000611375 151 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 uc_338.32-201ENST00000615087 172 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 AC005296.1-201ENST00000616145 209 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 MIR6875-201ENST00000617506 72 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.63□□□□□ -1.83
GFRA1P56159 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.63□□□□□ -1.83
GFRA1P56159 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
GFRA1P56159 AC073073.2-201ENST00000609827 2578 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GFRA1P56159 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
GFRA1P56159 MTND5P6-201ENST00000422338 1798 ntBASIC3.63□□□□□ -1.83
GFRA1P56159 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.63□□□□□ -1.83
GFRA1P56159 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.63□□□□□ -1.83
GFRA1P56159 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
GFRA1P56159 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.62□□□□□ -1.83
GFRA1P56159 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.62□□□□□ -1.83
GFRA1P56159 AC010889.1-201ENST00000566193 2666 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
GFRA1P56159 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
GFRA1P56159 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
GFRA1P56159 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.62□□□□□ -1.83
GFRA1P56159 Y_RNA.143-201ENST00000363520 106 ntBASIC3.62□□□□□ -1.83
GFRA1P56159 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms