Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AL356274.2-201ENST00000624379 3752 ntBASIC2.98□□□□□ -1.93
FOXG1P55316 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
FOXG1P55316 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.97□□□□□ -1.93
FOXG1P55316 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.97□□□□□ -1.93
FOXG1P55316 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
FOXG1P55316 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
FOXG1P55316 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
FOXG1P55316 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.97□□□□□ -1.93
FOXG1P55316 AL049781.1-201ENST00000623195 3585 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
FOXG1P55316 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
FOXG1P55316 Y_RNA.150-201ENST00000363562 102 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 SNORD46.1-201ENST00000364139 104 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 RNA5SP387-201ENST00000364226 106 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 RNU4-50P-201ENST00000364361 141 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 Y_RNA.462-201ENST00000384268 102 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 Y_RNA.471-201ENST00000384312 102 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 Y_RNA.533-201ENST00000384596 114 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 Y_RNA.539-201ENST00000384635 107 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 MIR625-201ENST00000385047 85 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 RNU2-33P-201ENST00000410344 192 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 RNU2-14P-201ENST00000411053 191 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 CYCSP33-201ENST00000414485 327 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 UBE2D3P2-201ENST00000424409 445 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
FOXG1P55316 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.97□□□□□ -1.93
FOXG1P55316 SNORA70.19-201ENST00000516717 90 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 RNU6-914P-201ENST00000516749 109 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 MIR2276-201ENST00000516886 89 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 RN7SKP258-201ENST00000517151 304 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 AMZ2P1-203ENST00000565833 850 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.97□□□□□ -1.93
FOXG1P55316 AL162713.1-201ENST00000604480 262 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 MIR4275-201ENST00000636486 87 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
FOXG1P55316 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
FOXG1P55316 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
FOXG1P55316 MFSD8-233ENST00000641482 4860 ntBASIC2.97□□□□□ -1.93
FOXG1P55316 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.96□□□□□ -1.94
FOXG1P55316 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
FOXG1P55316 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
FOXG1P55316 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.96□□□□□ -1.94
FOXG1P55316 RNA5SP267-201ENST00000364893 126 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 RNU6-1074P-201ENST00000383995 104 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 Y_RNA.416-201ENST00000384014 113 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 Y_RNA.478-201ENST00000384358 107 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
FOXG1P55316 RNU6-130P-201ENST00000411112 103 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 AC063979.1-201ENST00000415539 377 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.96□□□□□ -1.94
FOXG1P55316 RPS15AP6-201ENST00000420703 385 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 AC092423.1-201ENST00000430165 186 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.96□□□□□ -1.94
FOXG1P55316 DAP3P1-201ENST00000441522 278 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.96□□□□□ -1.94
FOXG1P55316 AL139109.1-201ENST00000455491 297 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 snoU13.22-201ENST00000459428 104 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 RPL21P104-201ENST00000464143 478 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 AC091153.1-201ENST00000466297 402 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 RPL23AP14-201ENST00000468281 468 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 RPL7P5-201ENST00000471472 736 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 RPL21P13-201ENST00000488305 481 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 FCF1P8-201ENST00000510322 597 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 SNORA31.3-201ENST00000516029 96 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.96□□□□□ -1.94
FOXG1P55316 AC144568.1-201ENST00000520139 137 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.96□□□□□ -1.94
FOXG1P55316 TRAV32-201ENST00000553993 340 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.96□□□□□ -1.94
FOXG1P55316 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.96□□□□□ -1.94
FOXG1P55316 AC005951.2-201ENST00000576282 495 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 MIR3690-201ENST00000580266 75 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 RPS29P30-201ENST00000600975 111 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 AL390123.1-201ENST00000603216 237 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 AC123912.5-201ENST00000605470 343 ntBASIC2.96□□□□□ -1.94
FOXG1P55316 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.96□□□□□ -1.94
FOXG1P55316 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
FOXG1P55316 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
FOXG1P55316 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
FOXG1P55316 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
FOXG1P55316 Y_RNA.20-201ENST00000362479 113 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 Y_RNA.324-201ENST00000365165 102 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 Y_RNA.526-201ENST00000384572 110 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 Y_RNA.555-201ENST00000384673 110 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 MIR215-201ENST00000384858 110 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 MIR34B-201ENST00000385076 84 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 RNU6-817P-201ENST00000391083 104 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 RNU2-43P-201ENST00000410306 190 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 RN7SKP111-201ENST00000410349 271 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 RNU6-607P-201ENST00000411283 108 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 RNU2-71P-201ENST00000411395 189 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
FOXG1P55316 MTCO1P39-201ENST00000426148 480 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 RPL21P66-201ENST00000426566 466 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.95□□□□□ -1.94
FOXG1P55316 VDAC1P3-201ENST00000434069 851 ntBASIC2.95□□□□□ -1.94
FOXG1P55316 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.95□□□□□ -1.94
FOXG1P55316 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
FOXG1P55316 RPS4XP2-201ENST00000458402 793 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 265.6 ms