Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
CDH4P55283 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CDH4P55283 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CDH4P55283 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CDH4P55283 RNU6-212P-201ENST00000362642 104 ntBASIC1.85□□□□□ -2.11
CDH4P55283 RNU6-655P-201ENST00000362858 107 ntBASIC1.85□□□□□ -2.11
CDH4P55283 RNU6-529P-201ENST00000363383 104 ntBASIC1.85□□□□□ -2.11
CDH4P55283 RNU6-553P-201ENST00000364047 96 ntBASIC1.85□□□□□ -2.11
CDH4P55283 RNU6-487P-201ENST00000365430 104 ntBASIC1.85□□□□□ -2.11
CDH4P55283 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDH4P55283 MIR578-201ENST00000384828 96 ntBASIC1.85□□□□□ -2.11
CDH4P55283 RNU2-39P-201ENST00000410604 198 ntBASIC1.85□□□□□ -2.11
CDH4P55283 RNA5SP111-201ENST00000411386 101 ntBASIC1.85□□□□□ -2.11
CDH4P55283 AL356583.2-201ENST00000426536 280 ntBASIC1.85□□□□□ -2.11
CDH4P55283 AL365400.1-201ENST00000431854 640 ntBASIC1.85□□□□□ -2.11
CDH4P55283 RPS24P1-201ENST00000438550 371 ntBASIC1.85□□□□□ -2.11
CDH4P55283 RPL23AP3-201ENST00000453844 468 ntBASIC1.85□□□□□ -2.11
CDH4P55283 AC006512.1-201ENST00000468816 291 ntBASIC1.85□□□□□ -2.11
CDH4P55283 AC104564.1-201ENST00000493028 407 ntBASIC1.85□□□□□ -2.11
CDH4P55283 RPS29P11-201ENST00000496507 171 ntBASIC1.85□□□□□ -2.11
CDH4P55283 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CDH4P55283 AC117522.1-201ENST00000509821 380 ntBASIC1.85□□□□□ -2.11
CDH4P55283 RNU6-232P-201ENST00000517144 64 ntBASIC1.85□□□□□ -2.11
CDH4P55283 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH4P55283 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH4P55283 AP000763.2-201ENST00000540641 163 ntBASIC1.85□□□□□ -2.11
CDH4P55283 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.85□□□□□ -2.11
CDH4P55283 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.85□□□□□ -2.11
CDH4P55283 MIR4299-201ENST00000577899 72 ntBASIC1.85□□□□□ -2.11
CDH4P55283 HMGN1P30-201ENST00000589286 268 ntBASIC1.85□□□□□ -2.11
CDH4P55283 Z99289.3-201ENST00000605586 594 ntBASIC1.85□□□□□ -2.11
CDH4P55283 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.85□□□□□ -2.11
CDH4P55283 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDH4P55283 AC008555.8-201ENST00000623602 2168 ntBASIC1.85□□□□□ -2.11
CDH4P55283 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH4P55283 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CDH4P55283 OR4G2P-201ENST00000328113 903 ntBASIC1.84□□□□□ -2.11
CDH4P55283 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CDH4P55283 RNU6-622P-201ENST00000384272 103 ntBASIC1.84□□□□□ -2.11
CDH4P55283 SNORA24.1-201ENST00000384401 135 ntBASIC1.84□□□□□ -2.11
CDH4P55283 RNU6-1274P-201ENST00000384557 107 ntBASIC1.84□□□□□ -2.11
CDH4P55283 Y_RNA.560-201ENST00000384689 102 ntBASIC1.84□□□□□ -2.11
CDH4P55283 SNORA40.19-201ENST00000390846 128 ntBASIC1.84□□□□□ -2.11
CDH4P55283 AL031577.2-201ENST00000404133 280 ntBASIC1.84□□□□□ -2.11
CDH4P55283 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
CDH4P55283 RNU2-32P-201ENST00000411193 191 ntBASIC1.84□□□□□ -2.11
CDH4P55283 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
CDH4P55283 PGBD4P6-201ENST00000421501 610 ntBASIC1.84□□□□□ -2.11
CDH4P55283 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH4P55283 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH4P55283 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.84□□□□□ -2.11
CDH4P55283 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH4P55283 BZW1P2-201ENST00000473537 826 ntBASIC1.84□□□□□ -2.11
CDH4P55283 RPL23AP63-201ENST00000498752 471 ntBASIC1.84□□□□□ -2.11
CDH4P55283 MTND1P22-201ENST00000510572 951 ntBASIC1.84□□□□□ -2.11
CDH4P55283 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.84□□□□□ -2.11
CDH4P55283 Y_RNA.717-201ENST00000517106 92 ntBASIC1.84□□□□□ -2.11
CDH4P55283 SNORA31.23-201ENST00000517219 133 ntBASIC1.84□□□□□ -2.11
CDH4P55283 AP003392.2-201ENST00000527269 208 ntBASIC1.84□□□□□ -2.11
CDH4P55283 CYCSP27-201ENST00000527643 293 ntBASIC1.84□□□□□ -2.11
CDH4P55283 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.84□□□□□ -2.11
CDH4P55283 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH4P55283 AC022878.1-201ENST00000530684 149 ntBASIC1.84□□□□□ -2.11
CDH4P55283 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.84□□□□□ -2.11
CDH4P55283 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH4P55283 LRRC34P1-201ENST00000542742 915 ntBASIC1.84□□□□□ -2.11
CDH4P55283 AC005034.5-201ENST00000604219 466 ntBASIC1.84□□□□□ -2.11
CDH4P55283 AC112191.3-201ENST00000604371 277 ntBASIC1.84□□□□□ -2.11
CDH4P55283 AC087683.2-201ENST00000611384 326 ntBASIC1.84□□□□□ -2.11
CDH4P55283 AC005296.1-201ENST00000616145 209 ntBASIC1.84□□□□□ -2.11
CDH4P55283 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH4P55283 AC084768.2-201ENST00000622736 221 ntBASIC1.84□□□□□ -2.11
CDH4P55283 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.84□□□□□ -2.11
CDH4P55283 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CDH4P55283 RPS3AP36-201ENST00000398190 775 ntBASIC1.83□□□□□ -2.12
CDH4P55283 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
CDH4P55283 MTND4P20-201ENST00000424125 869 ntBASIC1.83□□□□□ -2.12
CDH4P55283 AL591806.2-201ENST00000433122 173 ntBASIC1.83□□□□□ -2.12
CDH4P55283 AL451074.3-201ENST00000437709 472 ntBASIC1.83□□□□□ -2.12
CDH4P55283 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH4P55283 TAF9P1-201ENST00000445421 515 ntBASIC1.83□□□□□ -2.12
CDH4P55283 RPL23AP6-201ENST00000446637 472 ntBASIC1.83□□□□□ -2.12
CDH4P55283 USP9YP12-201ENST00000450481 570 ntBASIC1.83□□□□□ -2.12
CDH4P55283 TAF9P2-201ENST00000454958 515 ntBASIC1.83□□□□□ -2.12
CDH4P55283 AC006026.2-201ENST00000457376 180 ntBASIC1.83□□□□□ -2.12
CDH4P55283 AL121594.1-201ENST00000475906 575 ntBASIC1.83□□□□□ -2.12
CDH4P55283 AP001025.1-201ENST00000486139 332 ntBASIC1.83□□□□□ -2.12
CDH4P55283 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.83□□□□□ -2.12
CDH4P55283 RBBP4P6-201ENST00000508098 202 ntBASIC1.83□□□□□ -2.12
CDH4P55283 AC106038.2-201ENST00000520706 568 ntBASIC1.83□□□□□ -2.12
CDH4P55283 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.83□□□□□ -2.12
CDH4P55283 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH4P55283 AC012065.4-201ENST00000602445 679 ntBASIC1.83□□□□□ -2.12
CDH4P55283 AC092354.1-201ENST00000606057 376 ntBASIC1.83□□□□□ -2.12
CDH4P55283 AL451064.1-201ENST00000607718 471 ntBASIC1.83□□□□□ -2.12
CDH4P55283 AC004908.3-201ENST00000610248 625 ntBASIC1.83□□□□□ -2.12
CDH4P55283 AC122133.1-201ENST00000613964 233 ntBASIC1.83□□□□□ -2.12
CDH4P55283 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH4P55283 AL157786.1-207ENST00000627771 695 ntBASIC1.83□□□□□ -2.12
CDH4P55283 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms