Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MIR4719-201ENST00000585233 84 ntBASIC3.29□□□□□ -1.88
COPAP53621 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.29□□□□□ -1.88
COPAP53621 AC010620.2-201ENST00000600135 313 ntBASIC3.29□□□□□ -1.88
COPAP53621 AL670379.10-201ENST00000604330 253 ntBASIC3.29□□□□□ -1.88
COPAP53621 AL670379.9-201ENST00000605428 253 ntBASIC3.29□□□□□ -1.88
COPAP53621 U1.23-201ENST00000610293 146 ntBASIC3.29□□□□□ -1.88
COPAP53621 RNU1-68P-201ENST00000615382 146 ntBASIC3.29□□□□□ -1.88
COPAP53621 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.29□□□□□ -1.88
COPAP53621 U1.39-201ENST00000621562 146 ntBASIC3.29□□□□□ -1.88
COPAP53621 AC090574.1-201ENST00000623186 233 ntBASIC3.29□□□□□ -1.88
COPAP53621 SCARNA4-202ENST00000625402 129 ntBASIC3.29□□□□□ -1.88
COPAP53621 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COPAP53621 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.29□□□□□ -1.88
COPAP53621 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
COPAP53621 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COPAP53621 RNU6-1280P-201ENST00000365211 107 ntBASIC3.28□□□□□ -1.88
COPAP53621 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COPAP53621 Y_RNA.460-201ENST00000384255 102 ntBASIC3.28□□□□□ -1.88
COPAP53621 MIR518D-201ENST00000385014 87 ntBASIC3.28□□□□□ -1.88
COPAP53621 SNORD73A-201ENST00000386062 65 ntBASIC3.28□□□□□ -1.88
COPAP53621 RN7SKP158-201ENST00000410453 326 ntBASIC3.28□□□□□ -1.88
COPAP53621 UBE2V1P4-201ENST00000425374 344 ntBASIC3.28□□□□□ -1.88
COPAP53621 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COPAP53621 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.28□□□□□ -1.88
COPAP53621 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.28□□□□□ -1.88
COPAP53621 AL031274.1-201ENST00000450334 232 ntBASIC3.28□□□□□ -1.88
COPAP53621 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COPAP53621 RN7SL863P-201ENST00000462370 296 ntBASIC3.28□□□□□ -1.88
COPAP53621 AC130509.1-201ENST00000464158 433 ntBASIC3.28□□□□□ -1.88
COPAP53621 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.28□□□□□ -1.88
COPAP53621 AC096745.1-201ENST00000509945 370 ntBASIC3.28□□□□□ -1.88
COPAP53621 RNA5SP217-201ENST00000515959 91 ntBASIC3.28□□□□□ -1.88
COPAP53621 RNU6-559P-201ENST00000516151 98 ntBASIC3.28□□□□□ -1.88
COPAP53621 RNU6-581P-201ENST00000516214 105 ntBASIC3.28□□□□□ -1.88
COPAP53621 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.28□□□□□ -1.88
COPAP53621 AP005597.4-201ENST00000526762 229 ntBASIC3.28□□□□□ -1.88
COPAP53621 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.28□□□□□ -1.88
COPAP53621 AL121821.2-201ENST00000556081 394 ntBASIC3.28□□□□□ -1.88
COPAP53621 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.28□□□□□ -1.88
COPAP53621 POLR3GP2-201ENST00000588366 668 ntBASIC3.28□□□□□ -1.88
COPAP53621 AC008739.2-201ENST00000597006 317 ntBASIC3.28□□□□□ -1.88
COPAP53621 AL137843.1-201ENST00000605078 385 ntBASIC3.28□□□□□ -1.88
COPAP53621 AC016727.1-205ENST00000605437 569 ntBASIC3.28□□□□□ -1.88
COPAP53621 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.28□□□□□ -1.88
COPAP53621 AC011890.2-201ENST00000613393 294 ntBASIC3.28□□□□□ -1.88
COPAP53621 AL162274.2-201ENST00000614406 332 ntBASIC3.28□□□□□ -1.88
COPAP53621 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.28□□□□□ -1.88
COPAP53621 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
COPAP53621 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COPAP53621 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.27□□□□□ -1.89
COPAP53621 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
COPAP53621 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
COPAP53621 RNU5E-7P-201ENST00000365290 117 ntBASIC3.27□□□□□ -1.89
COPAP53621 RNU6-1329P-201ENST00000365664 107 ntBASIC3.27□□□□□ -1.89
COPAP53621 RNU6-1297P-201ENST00000384415 104 ntBASIC3.27□□□□□ -1.89
COPAP53621 RNU6-1106P-201ENST00000390845 107 ntBASIC3.27□□□□□ -1.89
COPAP53621 RNU2-49P-201ENST00000410666 184 ntBASIC3.27□□□□□ -1.89
COPAP53621 RNU6-293P-201ENST00000411259 106 ntBASIC3.27□□□□□ -1.89
COPAP53621 AC023141.4-201ENST00000412031 328 ntBASIC3.27□□□□□ -1.89
COPAP53621 RPL32P35-201ENST00000415214 394 ntBASIC3.27□□□□□ -1.89
COPAP53621 Y_RNA.632-201ENST00000459189 102 ntBASIC3.27□□□□□ -1.89
COPAP53621 SNORA59A-201ENST00000459326 152 ntBASIC3.27□□□□□ -1.89
COPAP53621 AP001486.1-201ENST00000463339 476 ntBASIC3.27□□□□□ -1.89
COPAP53621 RPL23AP45-201ENST00000476406 468 ntBASIC3.27□□□□□ -1.89
COPAP53621 AC026241.1-201ENST00000517873 2142 ntBASIC3.27□□□□□ -1.89
COPAP53621 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.27□□□□□ -1.89
COPAP53621 AC022634.1-201ENST00000520765 532 ntBASIC3.27□□□□□ -1.89
COPAP53621 AP004607.1-201ENST00000524456 203 ntBASIC3.27□□□□□ -1.89
COPAP53621 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.27□□□□□ -1.89
COPAP53621 AC006199.1-201ENST00000548728 219 ntBASIC3.27□□□□□ -1.89
COPAP53621 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.27□□□□□ -1.89
COPAP53621 MIR2682-201ENST00000580305 110 ntBASIC3.27□□□□□ -1.89
COPAP53621 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.27□□□□□ -1.89
COPAP53621 AL157817.1-201ENST00000614264 790 ntBASIC3.27□□□□□ -1.89
COPAP53621 AC010378.1-201ENST00000619270 362 ntBASIC3.27□□□□□ -1.89
COPAP53621 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.27□□□□□ -1.89
COPAP53621 AC018692.3-201ENST00000623929 123 ntBASIC3.27□□□□□ -1.89
COPAP53621 AC006026.1-201ENST00000444025 1803 ntBASIC3.27□□□□□ -1.89
COPAP53621 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.27□□□□□ -1.89
COPAP53621 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
COPAP53621 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.26□□□□□ -1.89
COPAP53621 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.26□□□□□ -1.89
COPAP53621 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COPAP53621 MIR422A-201ENST00000362286 90 ntBASIC3.26□□□□□ -1.89
COPAP53621 SNORD56.5-201ENST00000364281 72 ntBASIC3.26□□□□□ -1.89
COPAP53621 Y_RNA.813-201ENST00000364639 102 ntBASIC3.26□□□□□ -1.89
COPAP53621 RNU1-100P-201ENST00000365255 165 ntBASIC3.26□□□□□ -1.89
COPAP53621 Y_RNA.431-201ENST00000384086 102 ntBASIC3.26□□□□□ -1.89
COPAP53621 AL445529.1-201ENST00000398713 389 ntBASIC3.26□□□□□ -1.89
COPAP53621 RNA5SP229-201ENST00000410809 99 ntBASIC3.26□□□□□ -1.89
COPAP53621 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.26□□□□□ -1.89
COPAP53621 SNORD56-201ENST00000413522 71 ntBASIC3.26□□□□□ -1.89
COPAP53621 AL513477.1-202ENST00000417061 214 ntBASIC3.26□□□□□ -1.89
COPAP53621 RPL7P37-201ENST00000425095 738 ntBASIC3.26□□□□□ -1.89
COPAP53621 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.26□□□□□ -1.89
COPAP53621 FABP5P14-201ENST00000437273 393 ntBASIC3.26□□□□□ -1.89
COPAP53621 NIPA2P5-201ENST00000452282 464 ntBASIC3.26□□□□□ -1.89
COPAP53621 AC006026.2-201ENST00000457376 180 ntBASIC3.26□□□□□ -1.89
COPAP53621 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.26□□□□□ -1.89
COPAP53621 HMGN1P13-201ENST00000505795 138 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms