Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-942P-201ENST00000363002 107 ntBASIC2.57□□□□□ -2
PDX1P52945 Y_RNA.573-201ENST00000384763 105 ntBASIC2.57□□□□□ -2
PDX1P52945 RNU6-332P-201ENST00000391193 108 ntBASIC2.57□□□□□ -2
PDX1P52945 U3.37-201ENST00000408528 213 ntBASIC2.57□□□□□ -2
PDX1P52945 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.57□□□□□ -2
PDX1P52945 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.57□□□□□ -2
PDX1P52945 RPL30P16-201ENST00000419341 429 ntBASIC2.57□□□□□ -2
PDX1P52945 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.57□□□□□ -2
PDX1P52945 MTND1P2-201ENST00000430604 821 ntBASIC2.57□□□□□ -2
PDX1P52945 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.57□□□□□ -2
PDX1P52945 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.57□□□□□ -2
PDX1P52945 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.57□□□□□ -2
PDX1P52945 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.57□□□□□ -2
PDX1P52945 AL590639.1-201ENST00000456484 337 ntBASIC2.57□□□□□ -2
PDX1P52945 AC083904.1-201ENST00000487828 231 ntBASIC2.57□□□□□ -2
PDX1P52945 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.57□□□□□ -2
PDX1P52945 AC116655.1-201ENST00000508324 901 ntBASIC2.57□□□□□ -2
PDX1P52945 AC008549.1-201ENST00000512900 643 ntBASIC2.57□□□□□ -2
PDX1P52945 SCARNA17.1-201ENST00000516211 143 ntBASIC2.57□□□□□ -2
PDX1P52945 SCARNA17.2-201ENST00000516334 143 ntBASIC2.57□□□□□ -2
PDX1P52945 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.57□□□□□ -2
PDX1P52945 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.57□□□□□ -2
PDX1P52945 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.57□□□□□ -2
PDX1P52945 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.57□□□□□ -2
PDX1P52945 MIR3605-201ENST00000583214 100 ntBASIC2.57□□□□□ -2
PDX1P52945 CTHRC1P1-201ENST00000605383 469 ntBASIC2.57□□□□□ -2
PDX1P52945 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.57□□□□□ -2
PDX1P52945 SCARNA17.4-201ENST00000614296 143 ntBASIC2.57□□□□□ -2
PDX1P52945 AC002553.4-201ENST00000616896 331 ntBASIC2.57□□□□□ -2
PDX1P52945 AC103705.1-201ENST00000619013 241 ntBASIC2.57□□□□□ -2
PDX1P52945 AC138627.2-201ENST00000624202 601 ntBASIC2.57□□□□□ -2
PDX1P52945 AC090617.10-201ENST00000624308 134 ntBASIC2.57□□□□□ -2
PDX1P52945 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
PDX1P52945 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.57□□□□□ -2
PDX1P52945 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
PDX1P52945 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.56□□□□□ -2
PDX1P52945 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.56□□□□□ -2
PDX1P52945 RNU6-82P-201ENST00000363970 107 ntBASIC2.56□□□□□ -2
PDX1P52945 RNU6-1280P-201ENST00000365211 107 ntBASIC2.56□□□□□ -2
PDX1P52945 RNU6-1283P-201ENST00000365314 105 ntBASIC2.56□□□□□ -2
PDX1P52945 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
PDX1P52945 AL512633.1-201ENST00000399931 655 ntBASIC2.56□□□□□ -2
PDX1P52945 RNU6-1148P-201ENST00000410992 104 ntBASIC2.56□□□□□ -2
PDX1P52945 AC096649.2-201ENST00000416186 393 ntBASIC2.56□□□□□ -2
PDX1P52945 RPL7P10-201ENST00000417407 739 ntBASIC2.56□□□□□ -2
PDX1P52945 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.56□□□□□ -2
PDX1P52945 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.56□□□□□ -2
PDX1P52945 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.56□□□□□ -2
PDX1P52945 SAR1AP4-201ENST00000429225 591 ntBASIC2.56□□□□□ -2
PDX1P52945 AC104332.2-201ENST00000429959 156 ntBASIC2.56□□□□□ -2
PDX1P52945 RPL23AP58-201ENST00000440453 469 ntBASIC2.56□□□□□ -2
PDX1P52945 RBMX2P4-201ENST00000441256 376 ntBASIC2.56□□□□□ -2
PDX1P52945 RPL39P40-201ENST00000445481 146 ntBASIC2.56□□□□□ -2
PDX1P52945 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.56□□□□□ -2
PDX1P52945 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.56□□□□□ -2
PDX1P52945 AC103975.1-201ENST00000482506 483 ntBASIC2.56□□□□□ -2
PDX1P52945 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
PDX1P52945 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.56□□□□□ -2
PDX1P52945 AC091885.1-201ENST00000506658 268 ntBASIC2.56□□□□□ -2
PDX1P52945 AC008413.1-201ENST00000511864 177 ntBASIC2.56□□□□□ -2
PDX1P52945 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.56□□□□□ -2
PDX1P52945 AC096725.1-201ENST00000514266 313 ntBASIC2.56□□□□□ -2
PDX1P52945 RNA5SP282-201ENST00000516355 108 ntBASIC2.56□□□□□ -2
PDX1P52945 SNORD19.2-201ENST00000516978 73 ntBASIC2.56□□□□□ -2
PDX1P52945 ACA59.2-201ENST00000517061 156 ntBASIC2.56□□□□□ -2
PDX1P52945 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.56□□□□□ -2
PDX1P52945 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
PDX1P52945 AL391813.1-201ENST00000603098 260 ntBASIC2.56□□□□□ -2
PDX1P52945 APOOP1-201ENST00000604695 592 ntBASIC2.56□□□□□ -2
PDX1P52945 AL121757.2-201ENST00000611223 313 ntBASIC2.56□□□□□ -2
PDX1P52945 Z69720.2-201ENST00000624755 279 ntBASIC2.56□□□□□ -2
PDX1P52945 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
PDX1P52945 AC138393.1-203ENST00000327086 343 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-37P-201ENST00000362692 107 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-11P-201ENST00000364234 107 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-25P-201ENST00000383873 107 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-1-201ENST00000383898 107 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-48P-201ENST00000384161 107 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-36P-201ENST00000384172 107 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-4P-201ENST00000384205 107 ntBASIC2.55□□□□□ -2
PDX1P52945 SNORA70B-201ENST00000384210 135 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-5P-201ENST00000384238 107 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-3P-201ENST00000384314 107 ntBASIC2.55□□□□□ -2
PDX1P52945 Y_RNA.480-201ENST00000384364 102 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-16P-201ENST00000384385 107 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-15P-201ENST00000384534 107 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-2-201ENST00000384627 107 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-29P-201ENST00000384637 107 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-9-201ENST00000384776 107 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU6-33P-201ENST00000384793 107 ntBASIC2.55□□□□□ -2
PDX1P52945 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.55□□□□□ -2
PDX1P52945 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.55□□□□□ -2
PDX1P52945 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PDX1P52945 HIGD1AP2-201ENST00000446367 280 ntBASIC2.55□□□□□ -2
PDX1P52945 GSTA11P-201ENST00000452866 669 ntBASIC2.55□□□□□ -2
PDX1P52945 RNU7-66P-201ENST00000459469 62 ntBASIC2.55□□□□□ -2
PDX1P52945 RPL31P41-201ENST00000477967 372 ntBASIC2.55□□□□□ -2
PDX1P52945 MRPL42P6-201ENST00000486397 371 ntBASIC2.55□□□□□ -2
PDX1P52945 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.55□□□□□ -2
PDX1P52945 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms