Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
GTF2A1P52655 MIR16-2-201ENST00000362117 81 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 Y_RNA.40-201ENST00000362645 93 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 RNU6-655P-201ENST00000362858 107 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 SNORD114-6-201ENST00000364393 72 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 RNU6-707P-201ENST00000364647 95 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
GTF2A1P52655 Z82205.1-201ENST00000428456 297 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 C8orf59P1-201ENST00000429930 303 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 FTH1P12-201ENST00000432137 551 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 AC092473.1-201ENST00000441098 221 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.59□□□□□ -2.31
GTF2A1P52655 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.59□□□□□ -2.31
GTF2A1P52655 RPS27P22-201ENST00000478056 241 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 RAP1BP2-201ENST00000478270 544 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 RNU6-1102P-201ENST00000516149 96 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.59□□□□□ -2.31
GTF2A1P52655 SLC2A13P1-201ENST00000531560 322 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.59□□□□□ -2.31
GTF2A1P52655 HMGB1P33-201ENST00000563485 527 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 AC126365.2-201ENST00000580630 379 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
GTF2A1P52655 AL133216.2-202ENST00000634512 349 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
GTF2A1P52655 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.59□□□□□ -2.32
GTF2A1P52655 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
GTF2A1P52655 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 RNU6-650P-201ENST00000365658 111 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 MIR520E-201ENST00000384867 87 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 MIR548B-201ENST00000385247 97 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 RNU6-360P-201ENST00000390944 104 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.58□□□□□ -2.32
GTF2A1P52655 SNX2P2-201ENST00000424553 323 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 MTND4P6-201ENST00000438297 472 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.58□□□□□ -2.32
GTF2A1P52655 MTND1P31-201ENST00000449206 961 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.58□□□□□ -2.32
GTF2A1P52655 TRBVA-201ENST00000498804 316 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 AC026414.1-201ENST00000504046 698 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 HMGB1P28-201ENST00000507778 552 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 AC010468.3-201ENST00000508225 458 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 RNU6-583P-201ENST00000516012 92 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 RNU6-1092P-201ENST00000516955 87 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 DEFB108E-201ENST00000524692 240 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.58□□□□□ -2.32
GTF2A1P52655 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.58□□□□□ -2.32
GTF2A1P52655 AP001981.2-201ENST00000603241 418 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.58□□□□□ -2.32
GTF2A1P52655 MIR6767-201ENST00000637302 66 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 AC018630.2-201ENST00000534866 2403 ntBASIC0.58□□□□□ -2.32
GTF2A1P52655 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.58□□□□□ -2.32
GTF2A1P52655 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.57□□□□□ -2.32
GTF2A1P52655 CDR1-202ENST00000625883 1485 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.57□□□□□ -2.32
GTF2A1P52655 RNU6-858P-201ENST00000362436 107 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 SNORA18.2-201ENST00000383865 132 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 RNU6-843P-201ENST00000384454 104 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
GTF2A1P52655 RNU6-482P-201ENST00000391068 107 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 CBX3P9-201ENST00000402326 552 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 FGF7P8-201ENST00000402994 292 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 HMGN1P14-201ENST00000412459 517 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.57□□□□□ -2.32
GTF2A1P52655 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.57□□□□□ -2.32
GTF2A1P52655 DEFB130D-201ENST00000426866 237 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.57□□□□□ -2.32
GTF2A1P52655 AL592045.1-201ENST00000429867 352 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 AL591043.1-201ENST00000432461 424 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 HMGN2P9-201ENST00000476875 229 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 RPF2P2-201ENST00000504693 896 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.57□□□□□ -2.32
GTF2A1P52655 SNORA3.4-201ENST00000515969 96 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 RNU6-113P-201ENST00000516653 101 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 SNORA31.19-201ENST00000517079 126 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.57□□□□□ -2.32
GTF2A1P52655 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.57□□□□□ -2.32
GTF2A1P52655 AL133153.1-201ENST00000557756 303 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 BNIP3P10-201ENST00000605360 577 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 AL365434.2-201ENST00000607979 234 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 AC084824.5-201ENST00000612009 413 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 AL589994.2-201ENST00000621124 579 ntBASIC0.57□□□□□ -2.32
GTF2A1P52655 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.57□□□□□ -2.32
GTF2A1P52655 RNU6-1210P-201ENST00000363775 107 ntBASIC0.56□□□□□ -2.32
GTF2A1P52655 MIR608-201ENST00000384820 100 ntBASIC0.56□□□□□ -2.32
GTF2A1P52655 MTND5P14-201ENST00000441481 1267 ntBASIC0.56□□□□□ -2.32
GTF2A1P52655 AL353752.1-201ENST00000454946 260 ntBASIC0.56□□□□□ -2.32
GTF2A1P52655 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.56□□□□□ -2.32
GTF2A1P52655 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.56□□□□□ -2.32
GTF2A1P52655 RNA5SP503-201ENST00000517047 117 ntBASIC0.56□□□□□ -2.32
GTF2A1P52655 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.56□□□□□ -2.32
GTF2A1P52655 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.56□□□□□ -2.32
GTF2A1P52655 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.56□□□□□ -2.32
GTF2A1P52655 VN1R83P-201ENST00000595685 445 ntBASIC0.56□□□□□ -2.32
GTF2A1P52655 BNIP3P30-201ENST00000601184 574 ntBASIC0.56□□□□□ -2.32
GTF2A1P52655 AC108706.1-201ENST00000611053 297 ntBASIC0.56□□□□□ -2.32
GTF2A1P52655 RMST_4.1-201ENST00000616886 107 ntBASIC0.56□□□□□ -2.32
GTF2A1P52655 MIR6835-201ENST00000621552 64 ntBASIC0.56□□□□□ -2.32
GTF2A1P52655 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.56□□□□□ -2.32
GTF2A1P52655 AC068647.2-201ENST00000637380 353 ntBASIC0.56□□□□□ -2.32
GTF2A1P52655 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms