Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MIR4765-201ENST00000585007 77 ntBASIC2.54□□□□□ -2
LHX1P48742 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
LHX1P48742 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.54□□□□□ -2
LHX1P48742 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.54□□□□□ -2
LHX1P48742 AC067747.1-201ENST00000608026 250 ntBASIC2.54□□□□□ -2
LHX1P48742 U2.17-201ENST00000611454 95 ntBASIC2.54□□□□□ -2
LHX1P48742 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
LHX1P48742 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.54□□□□□ -2
LHX1P48742 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.54□□□□□ -2
LHX1P48742 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.54□□□□□ -2
LHX1P48742 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.53□□□□□ -2
LHX1P48742 AL359854.1-201ENST00000614203 1594 ntBASIC2.53□□□□□ -2
LHX1P48742 RNU6-942P-201ENST00000363002 107 ntBASIC2.53□□□□□ -2
LHX1P48742 Y_RNA.399-201ENST00000383955 105 ntBASIC2.53□□□□□ -2
LHX1P48742 Y_RNA.516-201ENST00000384541 124 ntBASIC2.53□□□□□ -2
LHX1P48742 RNU4-53P-201ENST00000410828 140 ntBASIC2.53□□□□□ -2
LHX1P48742 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.53□□□□□ -2
LHX1P48742 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.53□□□□□ -2
LHX1P48742 Z98742.2-201ENST00000431564 187 ntBASIC2.53□□□□□ -2
LHX1P48742 AC079140.5-201ENST00000507882 310 ntBASIC2.53□□□□□ -2
LHX1P48742 RNU6-1281P-201ENST00000516223 105 ntBASIC2.53□□□□□ -2
LHX1P48742 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.53□□□□□ -2
LHX1P48742 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.53□□□□□ -2
LHX1P48742 MTCO3P23-201ENST00000561363 289 ntBASIC2.53□□□□□ -2
LHX1P48742 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.53□□□□□ -2
LHX1P48742 Z82243.1-201ENST00000609432 473 ntBASIC2.53□□□□□ -2
LHX1P48742 AC046143.2-201ENST00000609789 160 ntBASIC2.53□□□□□ -2
LHX1P48742 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.53□□□□□ -2
LHX1P48742 AL109809.4-201ENST00000603520 2185 ntBASIC2.53□□□□□ -2
LHX1P48742 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2.01
LHX1P48742 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
LHX1P48742 RNU6-483P-201ENST00000384088 108 ntBASIC2.52□□□□□ -2.01
LHX1P48742 RNU6-301P-201ENST00000384277 107 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AL133475.1-201ENST00000404414 305 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.52□□□□□ -2.01
LHX1P48742 BX682237.1-201ENST00000415016 335 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AL096701.2-201ENST00000416920 238 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AL365400.1-201ENST00000431854 640 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.52□□□□□ -2.01
LHX1P48742 HMGB1P31-201ENST00000437242 427 ntBASIC2.52□□□□□ -2.01
LHX1P48742 RNU7-167P-201ENST00000459160 62 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AC133134.1-201ENST00000466800 359 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AC082651.2-201ENST00000496833 166 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AC008413.1-201ENST00000511864 177 ntBASIC2.52□□□□□ -2.01
LHX1P48742 SNORA31.18-201ENST00000517043 134 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.52□□□□□ -2.01
LHX1P48742 AK6P1-201ENST00000540219 478 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AC004486.1-201ENST00000546846 233 ntBASIC2.52□□□□□ -2.01
LHX1P48742 ZNF519P2-201ENST00000557032 169 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.52□□□□□ -2.01
LHX1P48742 AC090616.3-201ENST00000582184 217 ntBASIC2.52□□□□□ -2.01
LHX1P48742 MIR4424-201ENST00000585257 86 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AL162413.1-201ENST00000603198 110 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AC008121.1-201ENST00000603244 268 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AC004492.1-201ENST00000607036 742 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AC138627.2-201ENST00000624202 601 ntBASIC2.52□□□□□ -2.01
LHX1P48742 MIR3529-201ENST00000637713 78 ntBASIC2.52□□□□□ -2.01
LHX1P48742 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.52□□□□□ -2.01
LHX1P48742 AC080128.1-201ENST00000474389 1917 ntBASIC2.52□□□□□ -2.01
LHX1P48742 AC138393.1-203ENST00000327086 343 ntBASIC2.51□□□□□ -2.01
LHX1P48742 RNU4-66P-201ENST00000365199 138 ntBASIC2.51□□□□□ -2.01
LHX1P48742 SNORD116-20-201ENST00000384529 92 ntBASIC2.51□□□□□ -2.01
LHX1P48742 RNU6-648P-201ENST00000410190 107 ntBASIC2.51□□□□□ -2.01
LHX1P48742 AC092427.1-202ENST00000430569 476 ntBASIC2.51□□□□□ -2.01
LHX1P48742 AL121601.2-201ENST00000438019 707 ntBASIC2.51□□□□□ -2.01
LHX1P48742 SEPT14P3-201ENST00000439401 183 ntBASIC2.51□□□□□ -2.01
LHX1P48742 AL732372.2-207ENST00000445840 183 ntBASIC2.51□□□□□ -2.01
LHX1P48742 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LHX1P48742 SEPT14P2-201ENST00000453405 183 ntBASIC2.51□□□□□ -2.01
LHX1P48742 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.51□□□□□ -2.01
LHX1P48742 RPL22P13-201ENST00000493291 347 ntBASIC2.51□□□□□ -2.01
LHX1P48742 CCDC34P1-201ENST00000507441 517 ntBASIC2.51□□□□□ -2.01
LHX1P48742 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LHX1P48742 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.51□□□□□ -2.01
LHX1P48742 SEPT14P4-201ENST00000513445 186 ntBASIC2.51□□□□□ -2.01
LHX1P48742 RNU5B-3P-201ENST00000516601 115 ntBASIC2.51□□□□□ -2.01
LHX1P48742 SNORA43.2-201ENST00000516652 128 ntBASIC2.51□□□□□ -2.01
LHX1P48742 FO082796.1-201ENST00000523795 183 ntBASIC2.51□□□□□ -2.01
LHX1P48742 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.51□□□□□ -2.01
LHX1P48742 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.51□□□□□ -2.01
LHX1P48742 MIR3199-1-201ENST00000582434 88 ntBASIC2.51□□□□□ -2.01
LHX1P48742 MIR3941-201ENST00000582572 103 ntBASIC2.51□□□□□ -2.01
LHX1P48742 MIR3117-201ENST00000584034 78 ntBASIC2.51□□□□□ -2.01
LHX1P48742 AC002044.1-201ENST00000606707 158 ntBASIC2.51□□□□□ -2.01
LHX1P48742 RNU6-91P-201ENST00000607774 107 ntBASIC2.51□□□□□ -2.01
LHX1P48742 YWHAEP7-203ENST00000622054 312 ntBASIC2.51□□□□□ -2.01
LHX1P48742 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.51□□□□□ -2.01
LHX1P48742 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
LHX1P48742 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LHX1P48742 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.51□□□□□ -2.01
LHX1P48742 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
LHX1P48742 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LHX1P48742 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LHX1P48742 RNU6-266P-201ENST00000364225 107 ntBASIC2.5□□□□□ -2.01
LHX1P48742 RNU5E-7P-201ENST00000365290 117 ntBASIC2.5□□□□□ -2.01
LHX1P48742 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LHX1P48742 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.5□□□□□ -2.01
LHX1P48742 MICF-203ENST00000432679 129 ntBASIC2.5□□□□□ -2.01
LHX1P48742 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.5□□□□□ -2.01
LHX1P48742 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms