Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 DUXAP5-201ENST00000529668 529 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.69□□□□□ -2.14
CXCL12P48061 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL12P48061 AC012409.4-201ENST00000612923 249 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AL133173.2-201ENST00000614270 90 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AC008250.2-201ENST00000615261 205 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AL359547.2-201ENST00000615810 418 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AC098657.3-201ENST00000620434 263 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AC091931.1-201ENST00000623488 728 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AC091932.3-201ENST00000624223 323 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AC103710.2-202ENST00000641454 2853 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AL359854.1-201ENST00000614203 1594 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.68□□□□□ -2.14
CXCL12P48061 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 SNORD3E-201ENST00000362899 217 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 RNU1-42P-201ENST00000364033 160 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 RNU6-392P-201ENST00000364926 101 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 RNU6-169P-201ENST00000365336 107 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 RNU6-395P-201ENST00000365662 106 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CXCL12P48061 RNU6-641P-201ENST00000384006 107 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 SNORA26.8-201ENST00000391306 124 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 CISD1P1-201ENST00000393907 327 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CXCL12P48061 AC016831.2-201ENST00000417179 352 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.68□□□□□ -2.14
CXCL12P48061 AL160275.3-201ENST00000423876 471 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.68□□□□□ -2.14
CXCL12P48061 MED13P1-201ENST00000428342 171 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.68□□□□□ -2.14
CXCL12P48061 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CXCL12P48061 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.68□□□□□ -2.14
CXCL12P48061 AL022238.1-201ENST00000442557 355 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.68□□□□□ -2.14
CXCL12P48061 AL137159.1-201ENST00000452808 512 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 DYNLL1P5-201ENST00000467158 270 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.68□□□□□ -2.14
CXCL12P48061 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.68□□□□□ -2.14
CXCL12P48061 RBBP4P6-201ENST00000508098 202 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.68□□□□□ -2.14
CXCL12P48061 AC117522.1-201ENST00000509821 380 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.68□□□□□ -2.14
CXCL12P48061 AC135279.1-201ENST00000543493 504 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 AC012414.6-201ENST00000568241 401 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 MIR5571-201ENST00000577998 113 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 AL121992.2-201ENST00000606262 256 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.68□□□□□ -2.14
CXCL12P48061 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.68□□□□□ -2.14
CXCL12P48061 SDR42E1P4-201ENST00000620894 481 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 MIR7157-201ENST00000635801 60 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 MTND5P30-201ENST00000452896 1731 ntBASIC1.68□□□□□ -2.14
CXCL12P48061 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.67□□□□□ -2.14
CXCL12P48061 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CXCL12P48061 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CXCL12P48061 RNY1P12-201ENST00000364251 105 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 RNU6-60P-201ENST00000364792 103 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 RNA5SP125-201ENST00000364843 120 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 RNU6-748P-201ENST00000384648 107 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 SNORA40.3-201ENST00000390964 122 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 CIR1P3-201ENST00000405137 479 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 FTH1P15-201ENST00000406984 280 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 MIR1276-201ENST00000408707 83 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 RNU2-8P-201ENST00000410727 190 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 HMGN1P14-201ENST00000412459 517 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.67□□□□□ -2.14
CXCL12P48061 AL031779.1-201ENST00000415663 330 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 MTND2P18-201ENST00000419962 1030 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 MTATP6P16-201ENST00000434543 526 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.67□□□□□ -2.14
CXCL12P48061 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.67□□□□□ -2.14
CXCL12P48061 RNU6-717P-201ENST00000459076 104 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.67□□□□□ -2.14
CXCL12P48061 MTND3P7-201ENST00000474435 343 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.67□□□□□ -2.14
CXCL12P48061 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.67□□□□□ -2.14
CXCL12P48061 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.67□□□□□ -2.14
CXCL12P48061 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.67□□□□□ -2.14
CXCL12P48061 AC112206.3-201ENST00000514578 389 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 SMURF2P1-201ENST00000514992 481 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.67□□□□□ -2.14
CXCL12P48061 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.67□□□□□ -2.14
CXCL12P48061 ADI1P3-201ENST00000549509 470 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 AC092325.1-201ENST00000566449 554 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 AC012213.3-201ENST00000577199 777 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 AC105245.1-201ENST00000581934 244 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 NIFKP6-201ENST00000598115 845 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 SEPT7P9-203ENST00000604116 343 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 AL022154.1-201ENST00000604698 785 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 AL139286.2-201ENST00000606838 396 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 AC069294.1-201ENST00000608397 350 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 MIR6504-201ENST00000613520 61 ntBASIC1.67□□□□□ -2.14
CXCL12P48061 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.67□□□□□ -2.14
CXCL12P48061 RNU6-61P-201ENST00000365528 109 ntBASIC1.66□□□□□ -2.14
CXCL12P48061 Y_RNA.466-201ENST00000384294 113 ntBASIC1.66□□□□□ -2.14
CXCL12P48061 RNU6-297P-201ENST00000384636 107 ntBASIC1.66□□□□□ -2.14
CXCL12P48061 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms