Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MIR518A2-201ENST00000384966 87 ntBASIC1.87□□□□□ -2.11
SSR1P43307 MIR561-201ENST00000385216 97 ntBASIC1.87□□□□□ -2.11
SSR1P43307 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SSR1P43307 AC068050.1-201ENST00000394891 380 ntBASIC1.87□□□□□ -2.11
SSR1P43307 RNU2-39P-201ENST00000410604 198 ntBASIC1.87□□□□□ -2.11
SSR1P43307 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.87□□□□□ -2.11
SSR1P43307 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.87□□□□□ -2.11
SSR1P43307 HMGB1P31-201ENST00000437242 427 ntBASIC1.87□□□□□ -2.11
SSR1P43307 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.87□□□□□ -2.11
SSR1P43307 MTND2P4-201ENST00000445034 1004 ntBASIC1.87□□□□□ -2.11
SSR1P43307 RPL23AP63-201ENST00000498752 471 ntBASIC1.87□□□□□ -2.11
SSR1P43307 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
SSR1P43307 RNU2-46P-201ENST00000517038 113 ntBASIC1.87□□□□□ -2.11
SSR1P43307 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.87□□□□□ -2.11
SSR1P43307 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.87□□□□□ -2.11
SSR1P43307 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.87□□□□□ -2.11
SSR1P43307 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.87□□□□□ -2.11
SSR1P43307 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.87□□□□□ -2.11
SSR1P43307 MIR3618-201ENST00000580330 88 ntBASIC1.87□□□□□ -2.11
SSR1P43307 AC009977.1-201ENST00000586015 570 ntBASIC1.87□□□□□ -2.11
SSR1P43307 WISP1-OT1-201ENST00000602893 642 ntBASIC1.87□□□□□ -2.11
SSR1P43307 uc_338.15-201ENST00000615470 191 ntBASIC1.87□□□□□ -2.11
SSR1P43307 AC063943.3-201ENST00000615562 356 ntBASIC1.87□□□□□ -2.11
SSR1P43307 AC009159.2-201ENST00000617603 606 ntBASIC1.87□□□□□ -2.11
SSR1P43307 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.87□□□□□ -2.11
SSR1P43307 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.87□□□□□ -2.11
SSR1P43307 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.87□□□□□ -2.11
SSR1P43307 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
SSR1P43307 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SSR1P43307 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.86□□□□□ -2.11
SSR1P43307 RNU6-622P-201ENST00000384272 103 ntBASIC1.86□□□□□ -2.11
SSR1P43307 MIR583-201ENST00000384846 75 ntBASIC1.86□□□□□ -2.11
SSR1P43307 MIR558-201ENST00000384920 94 ntBASIC1.86□□□□□ -2.11
SSR1P43307 MIR1262-201ENST00000408276 93 ntBASIC1.86□□□□□ -2.11
SSR1P43307 RNU4-26P-201ENST00000410270 107 ntBASIC1.86□□□□□ -2.11
SSR1P43307 RNU6-955P-201ENST00000410497 104 ntBASIC1.86□□□□□ -2.11
SSR1P43307 BX510359.4-201ENST00000423750 193 ntBASIC1.86□□□□□ -2.11
SSR1P43307 AC010099.3-201ENST00000423896 409 ntBASIC1.86□□□□□ -2.11
SSR1P43307 AL645568.3-201ENST00000433683 316 ntBASIC1.86□□□□□ -2.11
SSR1P43307 MTATP6P16-201ENST00000434543 526 ntBASIC1.86□□□□□ -2.11
SSR1P43307 RPS24P1-201ENST00000438550 371 ntBASIC1.86□□□□□ -2.11
SSR1P43307 TAF9P1-201ENST00000445421 515 ntBASIC1.86□□□□□ -2.11
SSR1P43307 AC003071.1-201ENST00000451219 789 ntBASIC1.86□□□□□ -2.11
SSR1P43307 AL353752.1-201ENST00000454946 260 ntBASIC1.86□□□□□ -2.11
SSR1P43307 TAF9P2-201ENST00000454958 515 ntBASIC1.86□□□□□ -2.11
SSR1P43307 AC006512.1-201ENST00000468816 291 ntBASIC1.86□□□□□ -2.11
SSR1P43307 MTND3P25-201ENST00000509243 135 ntBASIC1.86□□□□□ -2.11
SSR1P43307 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.86□□□□□ -2.11
SSR1P43307 AP004607.1-201ENST00000524456 203 ntBASIC1.86□□□□□ -2.11
SSR1P43307 ZNF321P-202ENST00000550843 495 ntBASIC1.86□□□□□ -2.11
SSR1P43307 IMMP1LP2-201ENST00000552954 492 ntBASIC1.86□□□□□ -2.11
SSR1P43307 RPL21P5-201ENST00000554662 472 ntBASIC1.86□□□□□ -2.11
SSR1P43307 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.86□□□□□ -2.11
SSR1P43307 AC103810.8-201ENST00000607347 118 ntBASIC1.86□□□□□ -2.11
SSR1P43307 AC098614.4-201ENST00000607601 462 ntBASIC1.86□□□□□ -2.11
SSR1P43307 RNU6-91P-201ENST00000607774 107 ntBASIC1.86□□□□□ -2.11
SSR1P43307 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.86□□□□□ -2.11
SSR1P43307 AC096772.1-201ENST00000609146 564 ntBASIC1.86□□□□□ -2.11
SSR1P43307 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.86□□□□□ -2.11
SSR1P43307 AC068787.1-201ENST00000623908 691 ntBASIC1.86□□□□□ -2.11
SSR1P43307 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.86□□□□□ -2.11
SSR1P43307 AL033519.2-201ENST00000403958 392 ntBASIC1.85□□□□□ -2.11
SSR1P43307 RN7SKP51-201ENST00000410781 304 ntBASIC1.85□□□□□ -2.11
SSR1P43307 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.85□□□□□ -2.11
SSR1P43307 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.85□□□□□ -2.11
SSR1P43307 AL360221.1-201ENST00000445989 335 ntBASIC1.85□□□□□ -2.11
SSR1P43307 MTCYBP1-201ENST00000454315 1119 ntBASIC1.85□□□□□ -2.11
SSR1P43307 AL121594.1-201ENST00000475906 575 ntBASIC1.85□□□□□ -2.11
SSR1P43307 RPS29P11-201ENST00000496507 171 ntBASIC1.85□□□□□ -2.11
SSR1P43307 Y_RNA.672-201ENST00000516289 104 ntBASIC1.85□□□□□ -2.11
SSR1P43307 AP005660.1-201ENST00000522972 293 ntBASIC1.85□□□□□ -2.11
SSR1P43307 AP002453.2-201ENST00000533503 320 ntBASIC1.85□□□□□ -2.11
SSR1P43307 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.85□□□□□ -2.11
SSR1P43307 AC109446.2-201ENST00000567872 497 ntBASIC1.85□□□□□ -2.11
SSR1P43307 MIR3198-2-201ENST00000577868 80 ntBASIC1.85□□□□□ -2.11
SSR1P43307 AC073539.2-201ENST00000597113 165 ntBASIC1.85□□□□□ -2.11
SSR1P43307 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.85□□□□□ -2.11
SSR1P43307 AC091304.9-201ENST00000612091 226 ntBASIC1.85□□□□□ -2.11
SSR1P43307 AC004223.4-201ENST00000612426 332 ntBASIC1.85□□□□□ -2.11
SSR1P43307 MIR7844-201ENST00000616161 122 ntBASIC1.85□□□□□ -2.11
SSR1P43307 U6.42-201ENST00000618440 107 ntBASIC1.85□□□□□ -2.11
SSR1P43307 AC008121.3-201ENST00000618726 433 ntBASIC1.85□□□□□ -2.11
SSR1P43307 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.84□□□□□ -2.11
SSR1P43307 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SSR1P43307 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SSR1P43307 RNU6-371P-201ENST00000364283 108 ntBASIC1.84□□□□□ -2.11
SSR1P43307 RNY4P34-201ENST00000364779 95 ntBASIC1.84□□□□□ -2.11
SSR1P43307 RNA5SP126-201ENST00000365092 109 ntBASIC1.84□□□□□ -2.11
SSR1P43307 SNORA20.2-201ENST00000383922 131 ntBASIC1.84□□□□□ -2.11
SSR1P43307 MIR597-201ENST00000384968 97 ntBASIC1.84□□□□□ -2.11
SSR1P43307 RNU2-32P-201ENST00000411193 191 ntBASIC1.84□□□□□ -2.11
SSR1P43307 RPL32P28-201ENST00000443577 397 ntBASIC1.84□□□□□ -2.11
SSR1P43307 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.84□□□□□ -2.11
SSR1P43307 MTCO3P9-201ENST00000506989 781 ntBASIC1.84□□□□□ -2.11
SSR1P43307 AC117522.1-201ENST00000509821 380 ntBASIC1.84□□□□□ -2.11
SSR1P43307 AC107393.1-201ENST00000512403 346 ntBASIC1.84□□□□□ -2.11
SSR1P43307 RNU6-1129P-201ENST00000515964 104 ntBASIC1.84□□□□□ -2.11
SSR1P43307 SNORA3.4-201ENST00000515969 96 ntBASIC1.84□□□□□ -2.11
SSR1P43307 SNORA43.2-201ENST00000516652 128 ntBASIC1.84□□□□□ -2.11
SSR1P43307 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms