Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.17□□□□□ -2.38
SNCAP37840 OR6C5P-201ENST00000452388 923 ntBASIC0.17□□□□□ -2.38
SNCAP37840 MTND3P4-201ENST00000453537 303 ntBASIC0.17□□□□□ -2.38
SNCAP37840 FABP5P15-201ENST00000453566 214 ntBASIC0.17□□□□□ -2.38
SNCAP37840 RNA5SP269-201ENST00000459032 137 ntBASIC0.17□□□□□ -2.38
SNCAP37840 RNU6-1183P-201ENST00000517054 60 ntBASIC0.17□□□□□ -2.38
SNCAP37840 RNA5SP437-201ENST00000517249 129 ntBASIC0.17□□□□□ -2.38
SNCAP37840 AP001893.2-201ENST00000526949 202 ntBASIC0.17□□□□□ -2.38
SNCAP37840 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.17□□□□□ -2.38
SNCAP37840 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.17□□□□□ -2.38
SNCAP37840 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.17□□□□□ -2.38
SNCAP37840 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.17□□□□□ -2.38
SNCAP37840 MIR5094-201ENST00000578766 85 ntBASIC0.17□□□□□ -2.38
SNCAP37840 AC107304.1-201ENST00000604229 296 ntBASIC0.17□□□□□ -2.38
SNCAP37840 AC093913.1-201ENST00000614178 329 ntBASIC0.17□□□□□ -2.38
SNCAP37840 AC018926.1-201ENST00000616335 435 ntBASIC0.17□□□□□ -2.38
SNCAP37840 AC013470.4-201ENST00000619978 986 ntBASIC0.17□□□□□ -2.38
SNCAP37840 AC023934.1-201ENST00000574529 2389 ntBASIC0.16□□□□□ -2.38
SNCAP37840 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
SNCAP37840 RNU4-79P-201ENST00000362764 141 ntBASIC0.16□□□□□ -2.38
SNCAP37840 RNU6-529P-201ENST00000363383 104 ntBASIC0.16□□□□□ -2.38
SNCAP37840 RNU6-944P-201ENST00000364023 107 ntBASIC0.16□□□□□ -2.38
SNCAP37840 RNU4-12P-201ENST00000365233 139 ntBASIC0.16□□□□□ -2.38
SNCAP37840 MIR186-201ENST00000384988 86 ntBASIC0.16□□□□□ -2.38
SNCAP37840 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
SNCAP37840 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.16□□□□□ -2.38
SNCAP37840 AL356776.1-201ENST00000406574 447 ntBASIC0.16□□□□□ -2.38
SNCAP37840 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.16□□□□□ -2.38
SNCAP37840 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.16□□□□□ -2.38
SNCAP37840 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.16□□□□□ -2.38
SNCAP37840 GAPDHP17-201ENST00000449858 1001 ntBASIC0.16□□□□□ -2.38
SNCAP37840 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.16□□□□□ -2.38
SNCAP37840 RNU1-131P-201ENST00000458943 161 ntBASIC0.16□□□□□ -2.38
SNCAP37840 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.16□□□□□ -2.38
SNCAP37840 AC010631.1-201ENST00000474150 156 ntBASIC0.16□□□□□ -2.38
SNCAP37840 AC048346.1-201ENST00000510247 144 ntBASIC0.16□□□□□ -2.38
SNCAP37840 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.16□□□□□ -2.38
SNCAP37840 AC025423.5-201ENST00000550230 219 ntBASIC0.16□□□□□ -2.38
SNCAP37840 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.16□□□□□ -2.38
SNCAP37840 AL078603.1-201ENST00000603824 313 ntBASIC0.16□□□□□ -2.38
SNCAP37840 AC112220.2-201ENST00000605513 533 ntBASIC0.16□□□□□ -2.38
SNCAP37840 AC009269.6-201ENST00000621778 588 ntBASIC0.16□□□□□ -2.38
SNCAP37840 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.16□□□□□ -2.38
SNCAP37840 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
SNCAP37840 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
SNCAP37840 RNU6-582P-201ENST00000362989 107 ntBASIC0.15□□□□□ -2.39
SNCAP37840 RNU6-1167P-201ENST00000363227 94 ntBASIC0.15□□□□□ -2.39
SNCAP37840 Y_RNA.164-201ENST00000363709 102 ntBASIC0.15□□□□□ -2.39
SNCAP37840 SNORD114-6-201ENST00000364393 72 ntBASIC0.15□□□□□ -2.39
SNCAP37840 RNU1-119P-201ENST00000391122 165 ntBASIC0.15□□□□□ -2.39
SNCAP37840 RPL21P1-201ENST00000399532 476 ntBASIC0.15□□□□□ -2.39
SNCAP37840 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.15□□□□□ -2.39
SNCAP37840 VN1R42P-201ENST00000424651 344 ntBASIC0.15□□□□□ -2.39
SNCAP37840 ISCA1P1-201ENST00000426679 387 ntBASIC0.15□□□□□ -2.39
SNCAP37840 Y_RNA.638-201ENST00000459374 113 ntBASIC0.15□□□□□ -2.39
SNCAP37840 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.15□□□□□ -2.39
SNCAP37840 RNA5SP481-201ENST00000516814 122 ntBASIC0.15□□□□□ -2.39
SNCAP37840 RNA5SP135-201ENST00000517019 125 ntBASIC0.15□□□□□ -2.39
SNCAP37840 MIR4711-201ENST00000578274 70 ntBASIC0.15□□□□□ -2.39
SNCAP37840 AL161798.1-201ENST00000604630 131 ntBASIC0.15□□□□□ -2.39
SNCAP37840 AC105148.1-201ENST00000604961 409 ntBASIC0.15□□□□□ -2.39
SNCAP37840 AC096586.1-201ENST00000610267 561 ntBASIC0.15□□□□□ -2.39
SNCAP37840 AL158163.2-201ENST00000619110 700 ntBASIC0.15□□□□□ -2.39
SNCAP37840 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
SNCAP37840 RNU1-133P-201ENST00000364867 167 ntBASIC0.14□□□□□ -2.39
SNCAP37840 RNU6-657P-201ENST00000383904 107 ntBASIC0.14□□□□□ -2.39
SNCAP37840 DHFRP6-201ENST00000401776 268 ntBASIC0.14□□□□□ -2.39
SNCAP37840 UBE2V1P11-201ENST00000411559 285 ntBASIC0.14□□□□□ -2.39
SNCAP37840 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.14□□□□□ -2.39
SNCAP37840 TAF13P2-201ENST00000416876 286 ntBASIC0.14□□□□□ -2.39
SNCAP37840 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.14□□□□□ -2.39
SNCAP37840 MTCO2P12-201ENST00000427426 682 ntBASIC0.14□□□□□ -2.39
SNCAP37840 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.14□□□□□ -2.39
SNCAP37840 AC104806.1-201ENST00000508720 308 ntBASIC0.14□□□□□ -2.39
SNCAP37840 SNORA31.4-201ENST00000516049 129 ntBASIC0.14□□□□□ -2.39
SNCAP37840 RNU6-965P-201ENST00000516721 96 ntBASIC0.14□□□□□ -2.39
SNCAP37840 AC093012.1-202ENST00000549403 582 ntBASIC0.14□□□□□ -2.39
SNCAP37840 AL353997.4-201ENST00000586196 166 ntBASIC0.14□□□□□ -2.39
SNCAP37840 LINC00216-201ENST00000623548 1126 ntBASIC0.14□□□□□ -2.39
SNCAP37840 U6.101-201ENST00000637707 76 ntBASIC0.14□□□□□ -2.39
SNCAP37840 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
SNCAP37840 Y_RNA.4-201ENST00000362333 112 ntBASIC0.13□□□□□ -2.39
SNCAP37840 RNA5SP432-201ENST00000362480 116 ntBASIC0.13□□□□□ -2.39
SNCAP37840 RNU6-637P-201ENST00000384050 107 ntBASIC0.13□□□□□ -2.39
SNCAP37840 Y_RNA.548-201ENST00000384656 105 ntBASIC0.13□□□□□ -2.39
SNCAP37840 MIR936-201ENST00000401264 98 ntBASIC0.13□□□□□ -2.39
SNCAP37840 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.13□□□□□ -2.39
SNCAP37840 RPL36AP53-201ENST00000432891 316 ntBASIC0.13□□□□□ -2.39
SNCAP37840 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.13□□□□□ -2.39
SNCAP37840 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.13□□□□□ -2.39
SNCAP37840 RPS27AP8-201ENST00000452665 445 ntBASIC0.13□□□□□ -2.39
SNCAP37840 RPL30P6-201ENST00000475925 342 ntBASIC0.13□□□□□ -2.39
SNCAP37840 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.13□□□□□ -2.39
SNCAP37840 RN7SKP12-201ENST00000516275 143 ntBASIC0.13□□□□□ -2.39
SNCAP37840 AL356057.1-201ENST00000533798 831 ntBASIC0.13□□□□□ -2.39
SNCAP37840 APOOP3-201ENST00000536787 586 ntBASIC0.13□□□□□ -2.39
SNCAP37840 AC090502.2-201ENST00000549267 280 ntBASIC0.13□□□□□ -2.39
SNCAP37840 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.13□□□□□ -2.39
SNCAP37840 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.13□□□□□ -2.39
SNCAP37840 AL139344.1-201ENST00000605228 195 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms