Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 HMGB3P17-201ENST00000504195 649 ntBASIC1.85□□□□□ -2.11
RORAP35398 RNU2-44P-201ENST00000516795 194 ntBASIC1.85□□□□□ -2.11
RORAP35398 AC090572.1-201ENST00000519251 160 ntBASIC1.85□□□□□ -2.11
RORAP35398 AC060788.1-201ENST00000521318 469 ntBASIC1.85□□□□□ -2.11
RORAP35398 AC107953.1-201ENST00000522216 297 ntBASIC1.85□□□□□ -2.11
RORAP35398 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.85□□□□□ -2.11
RORAP35398 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RORAP35398 OR5AL2P-201ENST00000532185 920 ntBASIC1.85□□□□□ -2.11
RORAP35398 ADI1P3-201ENST00000549509 470 ntBASIC1.85□□□□□ -2.11
RORAP35398 PSMA3P-201ENST00000555485 635 ntBASIC1.85□□□□□ -2.11
RORAP35398 AC110588.1-201ENST00000559699 137 ntBASIC1.85□□□□□ -2.11
RORAP35398 MIR4299-201ENST00000577899 72 ntBASIC1.85□□□□□ -2.11
RORAP35398 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.85□□□□□ -2.11
RORAP35398 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.85□□□□□ -2.11
RORAP35398 AL138889.2-201ENST00000603883 242 ntBASIC1.85□□□□□ -2.11
RORAP35398 AL139286.2-201ENST00000606838 396 ntBASIC1.85□□□□□ -2.11
RORAP35398 AC096772.1-201ENST00000609146 564 ntBASIC1.85□□□□□ -2.11
RORAP35398 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
RORAP35398 AC007494.3-201ENST00000624660 743 ntBASIC1.85□□□□□ -2.11
RORAP35398 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RORAP35398 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.85□□□□□ -2.11
RORAP35398 RBBP8P1-201ENST00000449447 1844 ntBASIC1.84□□□□□ -2.11
RORAP35398 RNU6-371P-201ENST00000364283 108 ntBASIC1.84□□□□□ -2.11
RORAP35398 SNORA20.2-201ENST00000383922 131 ntBASIC1.84□□□□□ -2.11
RORAP35398 MIR583-201ENST00000384846 75 ntBASIC1.84□□□□□ -2.11
RORAP35398 MIR10A-201ENST00000385043 110 ntBASIC1.84□□□□□ -2.11
RORAP35398 SNORA40.19-201ENST00000390846 128 ntBASIC1.84□□□□□ -2.11
RORAP35398 HMGN2P39-201ENST00000398005 273 ntBASIC1.84□□□□□ -2.11
RORAP35398 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
RORAP35398 RNU6-195P-201ENST00000411352 109 ntBASIC1.84□□□□□ -2.11
RORAP35398 RPS3AP3-201ENST00000411933 242 ntBASIC1.84□□□□□ -2.11
RORAP35398 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
RORAP35398 AC008267.5-201ENST00000424928 265 ntBASIC1.84□□□□□ -2.11
RORAP35398 MTND5P25-201ENST00000430499 799 ntBASIC1.84□□□□□ -2.11
RORAP35398 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.84□□□□□ -2.11
RORAP35398 AL627311.1-201ENST00000431514 115 ntBASIC1.84□□□□□ -2.11
RORAP35398 AL161788.1-201ENST00000441805 169 ntBASIC1.84□□□□□ -2.11
RORAP35398 CALM1P1-201ENST00000442082 433 ntBASIC1.84□□□□□ -2.11
RORAP35398 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.84□□□□□ -2.11
RORAP35398 RPL23AP7-203ENST00000449021 469 ntBASIC1.84□□□□□ -2.11
RORAP35398 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.84□□□□□ -2.11
RORAP35398 AC117522.1-201ENST00000509821 380 ntBASIC1.84□□□□□ -2.11
RORAP35398 RNU1-86P-201ENST00000516108 154 ntBASIC1.84□□□□□ -2.11
RORAP35398 RNU1-107P-201ENST00000516617 154 ntBASIC1.84□□□□□ -2.11
RORAP35398 MIR548AC-201ENST00000585049 88 ntBASIC1.84□□□□□ -2.11
RORAP35398 AC011494.1-201ENST00000596454 237 ntBASIC1.84□□□□□ -2.11
RORAP35398 AC090578.1-201ENST00000604955 591 ntBASIC1.84□□□□□ -2.11
RORAP35398 NDUFA8P1-201ENST00000605525 367 ntBASIC1.84□□□□□ -2.11
RORAP35398 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.84□□□□□ -2.11
RORAP35398 AC012360.2-201ENST00000609349 391 ntBASIC1.84□□□□□ -2.11
RORAP35398 AC093648.1-201ENST00000623546 606 ntBASIC1.84□□□□□ -2.11
RORAP35398 U3.13-201ENST00000364804 214 ntBASIC1.83□□□□□ -2.12
RORAP35398 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RORAP35398 RNU6-641P-201ENST00000384006 107 ntBASIC1.83□□□□□ -2.12
RORAP35398 RNU6-297P-201ENST00000384636 107 ntBASIC1.83□□□□□ -2.12
RORAP35398 MIR561-201ENST00000385216 97 ntBASIC1.83□□□□□ -2.12
RORAP35398 AL591034.2-201ENST00000402839 359 ntBASIC1.83□□□□□ -2.12
RORAP35398 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
RORAP35398 AC096920.1-201ENST00000423991 241 ntBASIC1.83□□□□□ -2.12
RORAP35398 AC000111.3-201ENST00000433478 193 ntBASIC1.83□□□□□ -2.12
RORAP35398 AC009961.2-201ENST00000435771 251 ntBASIC1.83□□□□□ -2.12
RORAP35398 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.83□□□□□ -2.12
RORAP35398 AC104058.1-201ENST00000448028 297 ntBASIC1.83□□□□□ -2.12
RORAP35398 AC012308.1-201ENST00000451232 178 ntBASIC1.83□□□□□ -2.12
RORAP35398 RPL23AP3-201ENST00000453844 468 ntBASIC1.83□□□□□ -2.12
RORAP35398 AP001025.1-201ENST00000486139 332 ntBASIC1.83□□□□□ -2.12
RORAP35398 MTAPP1-201ENST00000489154 819 ntBASIC1.83□□□□□ -2.12
RORAP35398 AC018868.1-201ENST00000491307 315 ntBASIC1.83□□□□□ -2.12
RORAP35398 AC091965.2-201ENST00000512324 613 ntBASIC1.83□□□□□ -2.12
RORAP35398 SNORA4.4-201ENST00000515921 135 ntBASIC1.83□□□□□ -2.12
RORAP35398 RNU6-548P-201ENST00000517083 115 ntBASIC1.83□□□□□ -2.12
RORAP35398 RNU6-685P-201ENST00000517088 95 ntBASIC1.83□□□□□ -2.12
RORAP35398 AP004607.1-201ENST00000524456 203 ntBASIC1.83□□□□□ -2.12
RORAP35398 AK6P1-201ENST00000540219 478 ntBASIC1.83□□□□□ -2.12
RORAP35398 AC233702.2-202ENST00000562547 291 ntBASIC1.83□□□□□ -2.12
RORAP35398 AC012414.6-201ENST00000568241 401 ntBASIC1.83□□□□□ -2.12
RORAP35398 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.83□□□□□ -2.12
RORAP35398 BNIP3P8-201ENST00000597863 560 ntBASIC1.83□□□□□ -2.12
RORAP35398 BNIP3P30-201ENST00000601184 574 ntBASIC1.83□□□□□ -2.12
RORAP35398 AL359740.1-201ENST00000624340 592 ntBASIC1.83□□□□□ -2.12
RORAP35398 AC019226.2-201ENST00000625973 424 ntBASIC1.83□□□□□ -2.12
RORAP35398 MIR3529-201ENST00000637713 78 ntBASIC1.83□□□□□ -2.12
RORAP35398 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RORAP35398 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RORAP35398 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
RORAP35398 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.82□□□□□ -2.12
RORAP35398 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RORAP35398 SNORD114-19-201ENST00000363072 75 ntBASIC1.82□□□□□ -2.12
RORAP35398 RNU6-1032P-201ENST00000384100 107 ntBASIC1.82□□□□□ -2.12
RORAP35398 RNU6-843P-201ENST00000384454 104 ntBASIC1.82□□□□□ -2.12
RORAP35398 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.82□□□□□ -2.12
RORAP35398 AC138623.1-201ENST00000418060 216 ntBASIC1.82□□□□□ -2.12
RORAP35398 CYCSP49-201ENST00000420810 319 ntBASIC1.82□□□□□ -2.12
RORAP35398 MTCYBP5-201ENST00000423752 1135 ntBASIC1.82□□□□□ -2.12
RORAP35398 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.82□□□□□ -2.12
RORAP35398 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.82□□□□□ -2.12
RORAP35398 HMGB1P30-201ENST00000492455 606 ntBASIC1.82□□□□□ -2.12
RORAP35398 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RORAP35398 RNU6-991P-201ENST00000516168 107 ntBASIC1.82□□□□□ -2.12
RORAP35398 SNORA48.11-201ENST00000517015 89 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms