Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC092106.3-201ENST00000611308 722 ntBASIC-0.17□□□□□ -2.44
CPS1P31327 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC-0.18□□□□□ -2.44
CPS1P31327 NANOGP2-201ENST00000435391 727 ntBASIC-0.18□□□□□ -2.44
CPS1P31327 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.18□□□□□ -2.44
CPS1P31327 OARD1-209ENST00000471367 401 ntTSL 2 BASIC-0.18□□□□□ -2.44
CPS1P31327 MIRLET7D-201ENST00000362263 87 ntBASIC-0.18□□□□□ -2.44
CPS1P31327 SNORD114-28-201ENST00000363610 72 ntBASIC-0.18□□□□□ -2.44
CPS1P31327 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
CPS1P31327 SNORD89-201ENST00000390981 114 ntBASIC-0.18□□□□□ -2.44
CPS1P31327 AL592447.1-201ENST00000447592 540 ntBASIC-0.18□□□□□ -2.44
CPS1P31327 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.18□□□□□ -2.44
CPS1P31327 AC104057.1-201ENST00000515547 497 ntBASIC-0.18□□□□□ -2.44
CPS1P31327 RNU6-1095P-201ENST00000516148 108 ntBASIC-0.18□□□□□ -2.44
CPS1P31327 AP003392.2-201ENST00000527269 208 ntBASIC-0.18□□□□□ -2.44
CPS1P31327 CYCSP27-201ENST00000527643 293 ntBASIC-0.18□□□□□ -2.44
CPS1P31327 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.18□□□□□ -2.44
CPS1P31327 AC090116.1-201ENST00000615679 446 ntBASIC-0.18□□□□□ -2.44
CPS1P31327 RNU6-1251P-201ENST00000364502 107 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 RNU6-302P-201ENST00000365249 107 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 RNU4-45P-201ENST00000365469 141 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 SNORD65-201ENST00000391079 73 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 MTATP6P31-201ENST00000406985 692 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 MIR1468-201ENST00000410600 86 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 AL161935.2-201ENST00000414627 60 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC-0.19□□□□□ -2.44
CPS1P31327 MTCO3P5-201ENST00000433620 714 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 HMGN2P34-201ENST00000437647 269 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.19□□□□□ -2.44
CPS1P31327 SNORA68.3-201ENST00000515906 83 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 RNVU1-2-201ENST00000516326 135 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 RNA5SP255-201ENST00000516370 107 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 RNU6-1308P-201ENST00000516817 103 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-0.19□□□□□ -2.44
CPS1P31327 AC068790.6-201ENST00000602558 258 ntBASIC-0.19□□□□□ -2.44
CPS1P31327 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.19□□□□□ -2.44
CPS1P31327 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.2□□□□□ -2.44
CPS1P31327 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.2□□□□□ -2.44
CPS1P31327 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC-0.2□□□□□ -2.44
CPS1P31327 AP1S2P1-201ENST00000457344 379 ntBASIC-0.2□□□□□ -2.44
CPS1P31327 AL356157.2-201ENST00000605122 111 ntBASIC-0.2□□□□□ -2.44
CPS1P31327 AC009237.15-201ENST00000610252 501 ntBASIC-0.2□□□□□ -2.44
CPS1P31327 AC090772.4-201ENST00000623599 362 ntBASIC-0.2□□□□□ -2.44
CPS1P31327 RNU6-217P-201ENST00000384164 104 ntBASIC-0.21□□□□□ -2.44
CPS1P31327 RNU6-1226P-201ENST00000384317 107 ntBASIC-0.21□□□□□ -2.44
CPS1P31327 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.21□□□□□ -2.44
CPS1P31327 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.21□□□□□ -2.44
CPS1P31327 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.21□□□□□ -2.44
CPS1P31327 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.21□□□□□ -2.44
CPS1P31327 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.21□□□□□ -2.44
CPS1P31327 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.21□□□□□ -2.44
CPS1P31327 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.21□□□□□ -2.44
CPS1P31327 AC025588.3-201ENST00000604182 274 ntBASIC-0.21□□□□□ -2.44
CPS1P31327 AC055876.5-201ENST00000605667 259 ntBASIC-0.21□□□□□ -2.44
CPS1P31327 Z82243.1-201ENST00000609432 473 ntBASIC-0.21□□□□□ -2.44
CPS1P31327 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
CPS1P31327 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 SNORD49B-201ENST00000365172 72 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 RNU6-514P-201ENST00000384208 107 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 MIR153-2-201ENST00000385225 87 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 SNX2P2-201ENST00000424553 323 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 AL590383.1-201ENST00000428602 75 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 RPL36P19-201ENST00000430744 301 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 AL049874.1-201ENST00000489560 388 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.22□□□□□ -2.44
CPS1P31327 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.22□□□□□ -2.44
CPS1P31327 AL121579.1-201ENST00000555129 305 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 EIF1P4-201ENST00000572664 335 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 AP003465.2-201ENST00000602571 373 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 AC100812.1-201ENST00000607622 580 ntBASIC-0.22□□□□□ -2.44
CPS1P31327 MTND4P8-201ENST00000514997 1362 ntBASIC-0.22□□□□□ -2.45
CPS1P31327 RNU6-654P-201ENST00000364373 107 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 RNU6-46P-201ENST00000383860 107 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 AL591034.2-201ENST00000402839 359 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 RNA5SP451-201ENST00000410588 110 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.23□□□□□ -2.45
CPS1P31327 MTND4LP10-201ENST00000435146 291 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 YWHAZP8-201ENST00000436935 731 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 AC002429.1-201ENST00000437672 148 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.23□□□□□ -2.45
CPS1P31327 RNU6-491P-201ENST00000516099 110 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 ADAM3B-201ENST00000569937 840 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 RNU4-5P-201ENST00000607255 135 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 AC098614.4-201ENST00000607601 462 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 AC073968.1-201ENST00000618594 637 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 MIR1262-201ENST00000408276 93 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.23□□□□□ -2.45
CPS1P31327 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC-0.23□□□□□ -2.45
CPS1P31327 AC063976.4-201ENST00000421971 163 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 TIMM9P1-201ENST00000436122 256 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.23□□□□□ -2.45
CPS1P31327 SMURF2P1-201ENST00000514992 481 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 RNU6-319P-201ENST00000516025 108 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 MIR3664-201ENST00000579074 99 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.23□□□□□ -2.45
CPS1P31327 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.23□□□□□ -2.45
CPS1P31327 ANKRD26P2-201ENST00000445530 1710 ntBASIC-0.23□□□□□ -2.45
CPS1P31327 SNORD118-201ENST00000363593 134 ntBASIC-0.24□□□□□ -2.45
CPS1P31327 MIR938-201ENST00000401216 83 ntBASIC-0.24□□□□□ -2.45
CPS1P31327 BPY2DP-201ENST00000422208 265 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms