Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
HOXA13P31271 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HOXA13P31271 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
HOXA13P31271 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
HOXA13P31271 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
HOXA13P31271 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
HOXA13P31271 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.83□□□□□ -1.96
HOXA13P31271 Y_RNA.160-201ENST00000363677 92 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 SNORD114-30-201ENST00000364448 72 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 RNU1-100P-201ENST00000365255 165 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 RNU6-1127P-201ENST00000384580 107 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HOXA13P31271 AL445529.1-201ENST00000398713 389 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXA13P31271 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXA13P31271 RPL23AP45-201ENST00000476406 468 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HOXA13P31271 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXA13P31271 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.83□□□□□ -1.96
HOXA13P31271 RNU1-86P-201ENST00000516108 154 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 RNU6-1038P-201ENST00000516516 104 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 RNU1-107P-201ENST00000516617 154 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 SNORD19.2-201ENST00000516978 73 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.83□□□□□ -1.96
HOXA13P31271 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.83□□□□□ -1.96
HOXA13P31271 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.83□□□□□ -1.96
HOXA13P31271 MIR4435-1-201ENST00000582552 80 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 Z82243.1-201ENST00000609432 473 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.83□□□□□ -1.96
HOXA13P31271 AL031601.2-202ENST00000622650 282 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 AC009033.1-201ENST00000624279 431 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 AC090617.10-201ENST00000624308 134 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 MIR7515-201ENST00000637837 67 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HOXA13P31271 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.83□□□□□ -1.96
HOXA13P31271 ZNF519P1-201ENST00000449011 1626 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.82□□□□□ -1.96
HOXA13P31271 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.82□□□□□ -1.96
HOXA13P31271 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
HOXA13P31271 AL139276.1-201ENST00000311910 1001 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 RNU6-1303P-201ENST00000364841 107 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 RNU4-66P-201ENST00000365199 138 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HOXA13P31271 Y_RNA.573-201ENST00000384763 105 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 U3.37-201ENST00000408528 213 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 RNA5SP508-201ENST00000411327 119 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 AL353621.1-201ENST00000418219 243 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 SNRPEP10-201ENST00000420249 274 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 AL669831.1-202ENST00000428504 417 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 GTF2IP13-201ENST00000438487 386 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 NDUFB1P2-201ENST00000449477 176 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA13P31271 RNU7-180P-201ENST00000459240 63 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 RN7SL429P-201ENST00000479090 223 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 RN7SL489P-201ENST00000486185 223 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 RN7SL327P-201ENST00000488659 223 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA13P31271 AC025465.4-201ENST00000513422 638 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 SCARNA17.1-201ENST00000516211 143 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 RNA5SP76-201ENST00000516277 87 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 SCARNA17.2-201ENST00000516334 143 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 ACA59.2-201ENST00000517061 156 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXA13P31271 MIR4298-201ENST00000584380 73 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 AC091152.3-201ENST00000604227 325 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 U2.17-201ENST00000611454 95 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 SCARNA17.4-201ENST00000614296 143 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 RN7SL853P-201ENST00000617250 223 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 AC006504.8-201ENST00000621046 635 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 CTSLP2-204ENST00000629029 392 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.82□□□□□ -1.96
HOXA13P31271 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HOXA13P31271 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HOXA13P31271 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.82□□□□□ -1.96
HOXA13P31271 OR4G1P-203ENST00000641984 1631 ntBASIC2.82□□□□□ -1.96
HOXA13P31271 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
HOXA13P31271 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HOXA13P31271 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HOXA13P31271 RNU6-384P-201ENST00000364900 104 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 MIR514A2-201ENST00000385131 88 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 MIR514A3-201ENST00000385132 88 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 AL359511.1-201ENST00000402970 211 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 RN7SKP123-201ENST00000410732 291 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 Y_RNA.615-201ENST00000410769 117 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXA13P31271 RPL7P10-201ENST00000417407 739 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXA13P31271 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.81□□□□□ -1.96
HOXA13P31271 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.81□□□□□ -1.96
HOXA13P31271 USP9YP8-201ENST00000441913 500 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 SNRPEP8-201ENST00000442866 260 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 HIGD1AP2-201ENST00000446367 280 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 MTND3P16-201ENST00000452205 344 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXA13P31271 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.81□□□□□ -1.96
HOXA13P31271 HMGN2P26-201ENST00000463169 339 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 AC133134.1-201ENST00000466800 359 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 AC091951.2-201ENST00000500762 203 ntBASIC2.81□□□□□ -1.96
HOXA13P31271 AC008628.2-201ENST00000502605 298 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms