Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC019288.1-201ENST00000557918 224 ntBASIC1.16□□□□□ -2.22
CD40LGP29965 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.16□□□□□ -2.22
CD40LGP29965 AC015720.1-201ENST00000565251 277 ntBASIC1.16□□□□□ -2.22
CD40LGP29965 AC174048.1-201ENST00000603389 144 ntBASIC1.16□□□□□ -2.22
CD40LGP29965 AL596327.1-201ENST00000603629 213 ntBASIC1.16□□□□□ -2.22
CD40LGP29965 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CD40LGP29965 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CD40LGP29965 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
CD40LGP29965 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
CD40LGP29965 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
CD40LGP29965 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CD40LGP29965 RNU6-203P-201ENST00000384038 104 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 SNORA75B-201ENST00000384053 137 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 RNU6-72P-201ENST00000384285 79 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 Y_RNA.597-201ENST00000410463 100 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.15□□□□□ -2.23
CD40LGP29965 RPS27P16-201ENST00000425758 201 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 TOMM22P2-201ENST00000430735 237 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 UBE2V1P8-201ENST00000437166 265 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 MTND2P4-201ENST00000445034 1004 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.15□□□□□ -2.23
CD40LGP29965 AC009474.2-201ENST00000451383 136 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.15□□□□□ -2.23
CD40LGP29965 HMGN1P13-201ENST00000505795 138 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 AC112198.4-201ENST00000515450 351 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.15□□□□□ -2.23
CD40LGP29965 AC087441.2-201ENST00000529141 262 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 AL356057.1-201ENST00000533798 831 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CD40LGP29965 AC009977.1-201ENST00000586015 570 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.15□□□□□ -2.23
CD40LGP29965 AL590240.4-201ENST00000616908 390 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.15□□□□□ -2.23
CD40LGP29965 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.15□□□□□ -2.23
CD40LGP29965 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
CD40LGP29965 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CD40LGP29965 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CD40LGP29965 RNU6-212P-201ENST00000362642 104 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 SNORD33-201ENST00000362761 85 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 SMIM11P1-201ENST00000369586 178 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.14□□□□□ -2.23
CD40LGP29965 Y_RNA.472-201ENST00000384322 102 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 RNU6-298P-201ENST00000390888 96 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 Y_RNA.623-201ENST00000411128 95 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.14□□□□□ -2.23
CD40LGP29965 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.14□□□□□ -2.23
CD40LGP29965 RPS15AP10-201ENST00000432472 382 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 AL135790.2-201ENST00000437701 267 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 AC027119.1-201ENST00000440877 241 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 JTBP1-201ENST00000441314 247 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 USP9YP17-201ENST00000444617 696 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CD40LGP29965 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.14□□□□□ -2.23
CD40LGP29965 RPL26P26-201ENST00000480251 434 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 AC109445.1-201ENST00000512356 383 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.14□□□□□ -2.23
CD40LGP29965 AC068620.3-201ENST00000602749 560 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 AC078795.2-201ENST00000602835 1252 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 AC022022.2-201ENST00000602989 360 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 AL589994.2-201ENST00000621124 579 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 AC007792.1-201ENST00000623023 402 ntBASIC1.14□□□□□ -2.23
CD40LGP29965 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.14□□□□□ -2.23
CD40LGP29965 snoU2_19.1-201ENST00000362361 80 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 RNU6-296P-201ENST00000384608 107 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 RNU2-72P-201ENST00000411175 163 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 VPS26BP1-201ENST00000417155 755 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.13□□□□□ -2.23
CD40LGP29965 TIMM9P1-201ENST00000436122 256 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 HMGB1P31-201ENST00000437242 427 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.13□□□□□ -2.23
CD40LGP29965 AC093899.1-201ENST00000457984 376 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.13□□□□□ -2.23
CD40LGP29965 AL161670.1-201ENST00000554348 137 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.13□□□□□ -2.23
CD40LGP29965 AC009712.1-201ENST00000564938 316 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 AP000860.1-201ENST00000605250 559 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 AL158211.2-201ENST00000607282 395 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.13□□□□□ -2.23
CD40LGP29965 AL355472.4-201ENST00000610233 626 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 AC130324.3-201ENST00000614165 542 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 AL078604.3-201ENST00000615580 211 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 AC021755.4-201ENST00000616620 456 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 AL159153.1-201ENST00000619688 317 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 FRG1KP-201ENST00000623592 341 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
CD40LGP29965 ICE2P2-201ENST00000483823 2787 ntBASIC1.13□□□□□ -2.23
CD40LGP29965 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CD40LGP29965 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
CD40LGP29965 MIR412-201ENST00000362142 91 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 RNU4-13P-201ENST00000364019 141 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 SNORD114-6-201ENST00000364393 72 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 SNORD116-20-201ENST00000384529 92 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.12□□□□□ -2.23
CD40LGP29965 CST2P1-201ENST00000425770 87 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 AL589872.1-201ENST00000426602 288 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 AL669831.1-202ENST00000428504 417 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 AL627311.1-201ENST00000431514 115 ntBASIC1.12□□□□□ -2.23
CD40LGP29965 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms