Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RNU6-1120P-201ENST00000362988 108 ntBASIC2.63□□□□□ -1.99
BDNFP23560 SNORA25.6-201ENST00000364121 118 ntBASIC2.63□□□□□ -1.99
BDNFP23560 RNU6-1274P-201ENST00000384557 107 ntBASIC2.63□□□□□ -1.99
BDNFP23560 SNORA67.4-201ENST00000384688 142 ntBASIC2.63□□□□□ -1.99
BDNFP23560 AL512604.1-201ENST00000404812 257 ntBASIC2.63□□□□□ -1.99
BDNFP23560 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.63□□□□□ -1.99
BDNFP23560 CYCSP33-201ENST00000414485 327 ntBASIC2.63□□□□□ -1.99
BDNFP23560 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.63□□□□□ -1.99
BDNFP23560 AL139413.1-201ENST00000421309 217 ntBASIC2.63□□□□□ -1.99
BDNFP23560 CBX3P6-201ENST00000430257 527 ntBASIC2.63□□□□□ -1.99
BDNFP23560 RPL32P28-201ENST00000443577 397 ntBASIC2.63□□□□□ -1.99
BDNFP23560 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.63□□□□□ -1.99
BDNFP23560 C1DP4-201ENST00000455429 424 ntBASIC2.63□□□□□ -1.99
BDNFP23560 AC006512.1-201ENST00000468816 291 ntBASIC2.63□□□□□ -1.99
BDNFP23560 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.63□□□□□ -1.99
BDNFP23560 RPL23AP45-201ENST00000476406 468 ntBASIC2.63□□□□□ -1.99
BDNFP23560 MTCO3P7-201ENST00000510008 774 ntBASIC2.63□□□□□ -1.99
BDNFP23560 Y_RNA.695-201ENST00000516715 107 ntBASIC2.63□□□□□ -1.99
BDNFP23560 AC069113.1-201ENST00000517763 267 ntBASIC2.63□□□□□ -1.99
BDNFP23560 MTCO2P4-201ENST00000517968 247 ntBASIC2.63□□□□□ -1.99
BDNFP23560 SUB1P2-201ENST00000556401 297 ntBASIC2.63□□□□□ -1.99
BDNFP23560 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.63□□□□□ -1.99
BDNFP23560 AC091805.2-201ENST00000603848 235 ntBASIC2.63□□□□□ -1.99
BDNFP23560 AC087752.4-201ENST00000605911 462 ntBASIC2.63□□□□□ -1.99
BDNFP23560 AC104237.2-201ENST00000612456 443 ntBASIC2.63□□□□□ -1.99
BDNFP23560 AC099842.1-201ENST00000619919 596 ntBASIC2.63□□□□□ -1.99
BDNFP23560 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.63□□□□□ -1.99
BDNFP23560 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
BDNFP23560 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
BDNFP23560 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
BDNFP23560 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.62□□□□□ -1.99
BDNFP23560 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
BDNFP23560 RNA5SP126-201ENST00000365092 109 ntBASIC2.62□□□□□ -1.99
BDNFP23560 BTF3P7-201ENST00000407097 488 ntBASIC2.62□□□□□ -1.99
BDNFP23560 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.62□□□□□ -1.99
BDNFP23560 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
BDNFP23560 AC007969.2-201ENST00000441891 191 ntBASIC2.62□□□□□ -1.99
BDNFP23560 PRPS1P1-201ENST00000445305 876 ntBASIC2.62□□□□□ -1.99
BDNFP23560 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
BDNFP23560 RPS27P21-201ENST00000486977 252 ntBASIC2.62□□□□□ -1.99
BDNFP23560 SNORA31.11-201ENST00000516528 139 ntBASIC2.62□□□□□ -1.99
BDNFP23560 MIR514B-201ENST00000516774 80 ntBASIC2.62□□□□□ -1.99
BDNFP23560 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
BDNFP23560 AC023050.3-201ENST00000541142 333 ntBASIC2.62□□□□□ -1.99
BDNFP23560 OSBPL9P5-201ENST00000542581 171 ntBASIC2.62□□□□□ -1.99
BDNFP23560 AC078795.2-201ENST00000602835 1252 ntBASIC2.62□□□□□ -1.99
BDNFP23560 AC005034.5-201ENST00000604219 466 ntBASIC2.62□□□□□ -1.99
BDNFP23560 AC008536.2-201ENST00000607284 349 ntBASIC2.62□□□□□ -1.99
BDNFP23560 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.62□□□□□ -1.99
BDNFP23560 AL158063.1-201ENST00000615349 536 ntBASIC2.62□□□□□ -1.99
BDNFP23560 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.62□□□□□ -1.99
BDNFP23560 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.62□□□□□ -1.99
BDNFP23560 CTSLP2-204ENST00000629029 392 ntBASIC2.62□□□□□ -1.99
BDNFP23560 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.62□□□□□ -1.99
BDNFP23560 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
BDNFP23560 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.61□□□□□ -1.99
BDNFP23560 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
BDNFP23560 ZNF658B-202ENST00000615961 3375 ntBASIC2.61□□□□□ -1.99
BDNFP23560 AL596028.1-201ENST00000326971 197 ntBASIC2.61□□□□□ -1.99
BDNFP23560 RNA5SP456-201ENST00000364002 114 ntBASIC2.61□□□□□ -1.99
BDNFP23560 U3.13-201ENST00000364804 214 ntBASIC2.61□□□□□ -1.99
BDNFP23560 SNORD116-8-201ENST00000384365 95 ntBASIC2.61□□□□□ -1.99
BDNFP23560 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.61□□□□□ -1.99
BDNFP23560 MTND4P32-201ENST00000437189 1237 ntBASIC2.61□□□□□ -1.99
BDNFP23560 AC022447.4-201ENST00000504053 364 ntBASIC2.61□□□□□ -1.99
BDNFP23560 ARL2BPP4-201ENST00000506854 471 ntBASIC2.61□□□□□ -1.99
BDNFP23560 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.61□□□□□ -1.99
BDNFP23560 AP003392.2-201ENST00000527269 208 ntBASIC2.61□□□□□ -1.99
BDNFP23560 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.61□□□□□ -1.99
BDNFP23560 AP000873.5-201ENST00000533906 236 ntBASIC2.61□□□□□ -1.99
BDNFP23560 AC103987.3-201ENST00000582071 292 ntBASIC2.61□□□□□ -1.99
BDNFP23560 MIR5092-201ENST00000583139 88 ntBASIC2.61□□□□□ -1.99
BDNFP23560 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.61□□□□□ -1.99
BDNFP23560 VN1R107P-201ENST00000601784 209 ntBASIC2.61□□□□□ -1.99
BDNFP23560 Z99497.2-201ENST00000603634 310 ntBASIC2.61□□□□□ -1.99
BDNFP23560 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.61□□□□□ -1.99
BDNFP23560 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
BDNFP23560 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.6□□□□□ -1.99
BDNFP23560 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
BDNFP23560 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
BDNFP23560 RNA5SP289-201ENST00000362332 137 ntBASIC2.6□□□□□ -1.99
BDNFP23560 Y_RNA.40-201ENST00000362645 93 ntBASIC2.6□□□□□ -1.99
BDNFP23560 RNU6-105P-201ENST00000363909 104 ntBASIC2.6□□□□□ -1.99
BDNFP23560 RNU4-56P-201ENST00000364700 142 ntBASIC2.6□□□□□ -1.99
BDNFP23560 RNU6-282P-201ENST00000365357 103 ntBASIC2.6□□□□□ -1.99
BDNFP23560 MIR544A-201ENST00000384855 91 ntBASIC2.6□□□□□ -1.99
BDNFP23560 AL445529.1-201ENST00000398713 389 ntBASIC2.6□□□□□ -1.99
BDNFP23560 AL359511.1-201ENST00000402970 211 ntBASIC2.6□□□□□ -1.99
BDNFP23560 RN7SKP284-201ENST00000411002 343 ntBASIC2.6□□□□□ -1.99
BDNFP23560 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.6□□□□□ -1.99
BDNFP23560 SRIP3-201ENST00000413200 219 ntBASIC2.6□□□□□ -1.99
BDNFP23560 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.6□□□□□ -1.99
BDNFP23560 AL669831.1-202ENST00000428504 417 ntBASIC2.6□□□□□ -1.99
BDNFP23560 GTF2IP13-201ENST00000438487 386 ntBASIC2.6□□□□□ -1.99
BDNFP23560 AC132479.1-201ENST00000449160 144 ntBASIC2.6□□□□□ -1.99
BDNFP23560 AL356010.1-201ENST00000456364 102 ntBASIC2.6□□□□□ -1.99
BDNFP23560 SNRPFP3-201ENST00000457792 225 ntBASIC2.6□□□□□ -1.99
BDNFP23560 RNU6-430P-201ENST00000517078 107 ntBASIC2.6□□□□□ -1.99
BDNFP23560 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.6□□□□□ -1.99
BDNFP23560 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms