Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MIR548F1-201ENST00000408667 84 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 RNA5SP56-201ENST00000410277 118 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 RAC1P6-201ENST00000423911 575 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 AC010975.2-201ENST00000427781 588 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 AC133104.1-201ENST00000429100 218 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.57□□□□□ -2.16
COL5A1P20908 AC024082.2-201ENST00000434771 238 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.57□□□□□ -2.16
COL5A1P20908 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.57□□□□□ -2.16
COL5A1P20908 AC108059.3-201ENST00000456388 214 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 AC109927.2-201ENST00000506416 303 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.57□□□□□ -2.16
COL5A1P20908 RNU6-718P-201ENST00000516166 105 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 RNU6-410P-201ENST00000517006 107 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 MTND1P35-201ENST00000526739 508 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 OR5AQ1P-201ENST00000527596 927 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL5A1P20908 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.57□□□□□ -2.16
COL5A1P20908 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.57□□□□□ -2.16
COL5A1P20908 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.57□□□□□ -2.16
COL5A1P20908 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.57□□□□□ -2.16
COL5A1P20908 MIR4421-201ENST00000578133 69 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 AL669831.4-202ENST00000590817 238 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 AC008945.2-201ENST00000606056 604 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 AC017083.3-201ENST00000609955 700 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 AC006329.2-201ENST00000611491 394 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 uc_338.12-201ENST00000616344 181 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 AC006338.1-201ENST00000618453 749 ntBASIC1.57□□□□□ -2.16
COL5A1P20908 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.57□□□□□ -2.16
COL5A1P20908 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
COL5A1P20908 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
COL5A1P20908 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL5A1P20908 Y_RNA.88-201ENST00000363029 99 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 RNU6-1155P-201ENST00000363554 107 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 RNY3P3-201ENST00000363816 102 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.56□□□□□ -2.16
COL5A1P20908 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
COL5A1P20908 RNU6-1027P-201ENST00000383998 107 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 RNU6-701P-201ENST00000384059 107 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 RPS3AP36-201ENST00000398190 775 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 CCDC58P2-201ENST00000417131 366 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.56□□□□□ -2.16
COL5A1P20908 USP9YP18-201ENST00000425912 695 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.56□□□□□ -2.16
COL5A1P20908 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.56□□□□□ -2.16
COL5A1P20908 RBMX2P4-201ENST00000441256 376 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC079448.1-201ENST00000449377 373 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.56□□□□□ -2.16
COL5A1P20908 AC003071.1-201ENST00000451219 789 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 MTND2P24-201ENST00000453434 806 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.56□□□□□ -2.16
COL5A1P20908 AC105252.1-201ENST00000503089 286 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC008526.1-201ENST00000509149 338 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.56□□□□□ -2.16
COL5A1P20908 AC104383.1-201ENST00000530297 370 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC008739.2-201ENST00000597006 317 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC112191.3-201ENST00000604371 277 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 Z84480.1-201ENST00000605131 311 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC068831.7-201ENST00000616954 363 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 MIR6076-201ENST00000617521 113 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.56□□□□□ -2.16
COL5A1P20908 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.56□□□□□ -2.16
COL5A1P20908 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
COL5A1P20908 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
COL5A1P20908 AC138915.1-201ENST00000565427 1685 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 Y_RNA.9-201ENST00000362354 101 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 Y_RNA.234-201ENST00000364409 97 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 Y_RNA.295-201ENST00000364918 102 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 SMIM11P1-201ENST00000369586 178 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 SNORA20.2-201ENST00000383922 131 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 Y_RNA.390-201ENST00000383932 102 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 RNU6-637P-201ENST00000384050 107 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AL109755.1-201ENST00000401791 649 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 RNU2-43P-201ENST00000410306 190 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 RNU4-55P-201ENST00000410731 137 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 RNU4-78P-201ENST00000410940 126 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 OR6C66P-201ENST00000414917 930 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 USP12PX-201ENST00000432383 1057 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC104850.1-201ENST00000435940 476 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.56□□□□□ -2.16
COL5A1P20908 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.56□□□□□ -2.16
COL5A1P20908 MTCO3P45-201ENST00000443036 613 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.56□□□□□ -2.16
COL5A1P20908 DDX3P2-201ENST00000446138 111 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC079781.2-201ENST00000446424 169 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.56□□□□□ -2.16
COL5A1P20908 RPS24P6-201ENST00000452670 400 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 RNU6-261P-201ENST00000459506 102 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.56□□□□□ -2.16
COL5A1P20908 AC004062.1-201ENST00000509926 645 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 RNU6-1073P-201ENST00000517182 106 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
COL5A1P20908 AP003034.1-201ENST00000534621 422 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AL161670.1-201ENST00000554348 137 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 AL157687.1-201ENST00000554853 619 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.56□□□□□ -2.16
COL5A1P20908 MED28P6-201ENST00000558776 231 ntBASIC1.56□□□□□ -2.16
COL5A1P20908 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms