Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 HIGD1AP1-201ENST00000550979 275 ntBASIC2.94□□□□□ -1.94
TNFRSF1BP20333 AC008121.1-201ENST00000603244 268 ntBASIC2.94□□□□□ -1.94
TNFRSF1BP20333 U3.45-201ENST00000607547 219 ntBASIC2.94□□□□□ -1.94
TNFRSF1BP20333 AC004852.3-201ENST00000614131 326 ntBASIC2.94□□□□□ -1.94
TNFRSF1BP20333 HMGB1P24-202ENST00000615653 685 ntBASIC2.94□□□□□ -1.94
TNFRSF1BP20333 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.94□□□□□ -1.94
TNFRSF1BP20333 AC099506.2-201ENST00000623074 221 ntBASIC2.94□□□□□ -1.94
TNFRSF1BP20333 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TNFRSF1BP20333 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
TNFRSF1BP20333 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TNFRSF1BP20333 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TNFRSF1BP20333 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TNFRSF1BP20333 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.93□□□□□ -1.94
TNFRSF1BP20333 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
TNFRSF1BP20333 SNORA31-201ENST00000362607 130 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 Y_RNA.188-201ENST00000363952 111 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 Y_RNA.557-201ENST00000384680 107 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 MIR591-201ENST00000385290 95 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.93□□□□□ -1.94
TNFRSF1BP20333 RNU2-23P-201ENST00000410545 195 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 RNU2-71P-201ENST00000411395 189 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFRSF1BP20333 PGBD4P6-201ENST00000421501 610 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC098614.2-201ENST00000426040 255 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC007560.1-201ENST00000426912 237 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC096644.2-201ENST00000429278 159 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 GOT2P5-201ENST00000433995 546 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 VDAC1P3-201ENST00000434069 851 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 RPS12P18-201ENST00000442381 270 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AL133547.1-201ENST00000448546 220 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.93□□□□□ -1.94
TNFRSF1BP20333 FTH1P2-201ENST00000466086 412 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC133134.1-201ENST00000466800 359 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 MTATP8P1-201ENST00000467115 207 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 RN7SL542P-201ENST00000467147 294 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TNFRSF1BP20333 RPL30P5-201ENST00000494923 336 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC114801.2-201ENST00000503825 781 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 PHBP14-201ENST00000512887 367 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 RNU6-120P-201ENST00000516077 103 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 RNU6-406P-201ENST00000516470 107 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 RNU6-572P-201ENST00000516724 80 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 RN7SKP40-201ENST00000517211 242 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC026403.1-201ENST00000518938 295 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC008269.2-201ENST00000561915 1105 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC009314.1-201ENST00000603871 304 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC136601.2-201ENST00000604356 474 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC006023.2-201ENST00000609916 167 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC027309.3-201ENST00000623419 351 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AL606534.2-204ENST00000635008 178 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TNFRSF1BP20333 AC118273.1-201ENST00000525324 3006 ntBASIC2.93□□□□□ -1.94
TNFRSF1BP20333 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.92□□□□□ -1.94
TNFRSF1BP20333 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TNFRSF1BP20333 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RPL9P7-201ENST00000330965 580 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RNU6-50P-201ENST00000362356 103 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RNU6-379P-201ENST00000363813 104 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 Y_RNA.176-201ENST00000363815 109 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RNU6-1317P-201ENST00000364582 104 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RNU6-702P-201ENST00000364982 107 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 U8.8-201ENST00000365399 135 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RNU6-827P-201ENST00000365553 106 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RNU6-166P-201ENST00000384371 107 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RNU6-1197P-201ENST00000391183 107 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RNU6-101P-201ENST00000410323 104 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 AL117339.3-201ENST00000418733 162 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFRSF1BP20333 AC006946.1-201ENST00000429106 328 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 HMGN2P31-201ENST00000432430 273 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 SNRPEP9-201ENST00000436794 238 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 AL513043.1-201ENST00000439124 535 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TNFRSF1BP20333 UQCRHP3-201ENST00000451503 251 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 AC092798.1-201ENST00000458542 409 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 U8.20-201ENST00000459445 131 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RPL21P104-201ENST00000464143 478 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 AC008155.2-201ENST00000464337 397 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RPL9P9-202ENST00000466501 579 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RPL23AP45-201ENST00000476406 468 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 AC022447.4-201ENST00000504053 364 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RNA5SP468-201ENST00000516782 93 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 RNU6-1271P-201ENST00000517049 105 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 AC023632.4-201ENST00000517783 191 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 IGHV3-76-201ENST00000522465 295 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.92□□□□□ -1.94
TNFRSF1BP20333 AC113195.1-201ENST00000579952 141 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 AC004805.2-201ENST00000605382 482 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 PRR13P7-201ENST00000605538 430 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 MIR3976-201ENST00000606807 139 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 AL161629.2-201ENST00000615347 275 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 MTND5P27-201ENST00000428871 1720 ntBASIC2.92□□□□□ -1.94
TNFRSF1BP20333 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms