Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 RNU2-29P-201ENST00000410423 189 ntBASIC2.07□□□□□ -2.08
SDC1P18827 AC016907.1-201ENST00000419483 435 ntBASIC2.07□□□□□ -2.08
SDC1P18827 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.07□□□□□ -2.08
SDC1P18827 WARS2P1-201ENST00000429678 537 ntBASIC2.07□□□□□ -2.08
SDC1P18827 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.07□□□□□ -2.08
SDC1P18827 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.07□□□□□ -2.08
SDC1P18827 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.07□□□□□ -2.08
SDC1P18827 RPL23AP49-201ENST00000492925 468 ntBASIC2.07□□□□□ -2.08
SDC1P18827 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.07□□□□□ -2.08
SDC1P18827 AC105313.1-201ENST00000509121 353 ntBASIC2.07□□□□□ -2.08
SDC1P18827 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.07□□□□□ -2.08
SDC1P18827 RNU2-69P-201ENST00000516061 100 ntBASIC2.07□□□□□ -2.08
SDC1P18827 RNA5SP200-201ENST00000516360 103 ntBASIC2.07□□□□□ -2.08
SDC1P18827 SNORA43.2-201ENST00000516652 128 ntBASIC2.07□□□□□ -2.08
SDC1P18827 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.07□□□□□ -2.08
SDC1P18827 CR383656.8-201ENST00000549046 145 ntBASIC2.07□□□□□ -2.08
SDC1P18827 BNIP3P6-201ENST00000549284 499 ntBASIC2.07□□□□□ -2.08
SDC1P18827 AC024909.2-201ENST00000553035 286 ntBASIC2.07□□□□□ -2.08
SDC1P18827 AC121758.2-201ENST00000553271 193 ntBASIC2.07□□□□□ -2.08
SDC1P18827 MIR5583-1-201ENST00000580941 59 ntBASIC2.07□□□□□ -2.08
SDC1P18827 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.07□□□□□ -2.08
SDC1P18827 AC021646.1-201ENST00000605469 484 ntBASIC2.07□□□□□ -2.08
SDC1P18827 AL121917.1-203ENST00000605534 577 ntBASIC2.07□□□□□ -2.08
SDC1P18827 AC103591.3-201ENST00000608684 209 ntBASIC2.07□□□□□ -2.08
SDC1P18827 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.07□□□□□ -2.08
SDC1P18827 AC026585.1-201ENST00000619582 524 ntBASIC2.07□□□□□ -2.08
SDC1P18827 RMST_7.1-201ENST00000621935 268 ntBASIC2.07□□□□□ -2.08
SDC1P18827 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SDC1P18827 ZNF658B-202ENST00000615961 3375 ntBASIC2.06□□□□□ -2.08
SDC1P18827 AC138393.1-203ENST00000327086 343 ntBASIC2.06□□□□□ -2.08
SDC1P18827 RNU4-24P-201ENST00000364565 139 ntBASIC2.06□□□□□ -2.08
SDC1P18827 RNA5SP125-201ENST00000364843 120 ntBASIC2.06□□□□□ -2.08
SDC1P18827 RNU6-1042P-201ENST00000384204 107 ntBASIC2.06□□□□□ -2.08
SDC1P18827 Y_RNA.559-201ENST00000384686 107 ntBASIC2.06□□□□□ -2.08
SDC1P18827 SNORD70.1-201ENST00000391007 85 ntBASIC2.06□□□□□ -2.08
SDC1P18827 SNORA48.3-201ENST00000391081 134 ntBASIC2.06□□□□□ -2.08
SDC1P18827 RAP1BP3-201ENST00000407180 549 ntBASIC2.06□□□□□ -2.08
SDC1P18827 RNU2-16P-201ENST00000410712 136 ntBASIC2.06□□□□□ -2.08
SDC1P18827 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.06□□□□□ -2.08
SDC1P18827 TOMM20P4-201ENST00000427861 435 ntBASIC2.06□□□□□ -2.08
SDC1P18827 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.06□□□□□ -2.08
SDC1P18827 HMGB1P31-201ENST00000437242 427 ntBASIC2.06□□□□□ -2.08
SDC1P18827 AC073415.1-201ENST00000449240 153 ntBASIC2.06□□□□□ -2.08
SDC1P18827 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.06□□□□□ -2.08
SDC1P18827 SCARNA18-201ENST00000459004 134 ntBASIC2.06□□□□□ -2.08
SDC1P18827 AL049873.1-201ENST00000480540 376 ntBASIC2.06□□□□□ -2.08
SDC1P18827 AP001025.1-201ENST00000486139 332 ntBASIC2.06□□□□□ -2.08
SDC1P18827 MTND3P5-201ENST00000512798 333 ntBASIC2.06□□□□□ -2.08
SDC1P18827 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.06□□□□□ -2.08
SDC1P18827 SNORA31.23-201ENST00000517219 133 ntBASIC2.06□□□□□ -2.08
SDC1P18827 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.06□□□□□ -2.08
SDC1P18827 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.06□□□□□ -2.08
SDC1P18827 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.06□□□□□ -2.08
SDC1P18827 AC136619.2-201ENST00000563361 631 ntBASIC2.06□□□□□ -2.08
SDC1P18827 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.06□□□□□ -2.08
SDC1P18827 AC093788.1-201ENST00000609356 927 ntBASIC2.06□□□□□ -2.08
SDC1P18827 AC093783.1-201ENST00000612976 329 ntBASIC2.06□□□□□ -2.08
SDC1P18827 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
SDC1P18827 MIR6132-201ENST00000622083 109 ntBASIC2.06□□□□□ -2.08
SDC1P18827 AC022418.1-201ENST00000624118 445 ntBASIC2.06□□□□□ -2.08
SDC1P18827 MIR3529-201ENST00000637713 78 ntBASIC2.06□□□□□ -2.08
SDC1P18827 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
SDC1P18827 AL354685.2-201ENST00000448218 1447 ntBASIC2.06□□□□□ -2.08
SDC1P18827 MTND5P6-201ENST00000422338 1798 ntBASIC2.05□□□□□ -2.08
SDC1P18827 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SDC1P18827 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.05□□□□□ -2.08
SDC1P18827 RNU6-78P-201ENST00000362897 107 ntBASIC2.05□□□□□ -2.08
SDC1P18827 Y_RNA.194-201ENST00000363985 102 ntBASIC2.05□□□□□ -2.08
SDC1P18827 RNU4-75P-201ENST00000364621 146 ntBASIC2.05□□□□□ -2.08
SDC1P18827 Y_RNA.324-201ENST00000365165 102 ntBASIC2.05□□□□□ -2.08
SDC1P18827 RNU6-996P-201ENST00000365438 107 ntBASIC2.05□□□□□ -2.08
SDC1P18827 RNU6-259P-201ENST00000383999 107 ntBASIC2.05□□□□□ -2.08
SDC1P18827 RNU6-622P-201ENST00000384272 103 ntBASIC2.05□□□□□ -2.08
SDC1P18827 RNU6-517P-201ENST00000384362 110 ntBASIC2.05□□□□□ -2.08
SDC1P18827 RNU6-393P-201ENST00000384475 107 ntBASIC2.05□□□□□ -2.08
SDC1P18827 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SDC1P18827 UBE2V1P10-201ENST00000414685 269 ntBASIC2.05□□□□□ -2.08
SDC1P18827 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.05□□□□□ -2.08
SDC1P18827 AC003685.2-201ENST00000422795 395 ntBASIC2.05□□□□□ -2.08
SDC1P18827 RPS3AP44-201ENST00000425466 790 ntBASIC2.05□□□□□ -2.08
SDC1P18827 DNAJC19P4-201ENST00000440115 345 ntBASIC2.05□□□□□ -2.08
SDC1P18827 RPL7P12-201ENST00000446719 750 ntBASIC2.05□□□□□ -2.08
SDC1P18827 AL031659.1-201ENST00000447075 539 ntBASIC2.05□□□□□ -2.08
SDC1P18827 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.05□□□□□ -2.08
SDC1P18827 AC090515.1-201ENST00000465295 476 ntBASIC2.05□□□□□ -2.08
SDC1P18827 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.05□□□□□ -2.08
SDC1P18827 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.05□□□□□ -2.08
SDC1P18827 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.05□□□□□ -2.08
SDC1P18827 LRRC34P2-201ENST00000514850 553 ntBASIC2.05□□□□□ -2.08
SDC1P18827 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
SDC1P18827 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.05□□□□□ -2.08
SDC1P18827 HIF1AP1-201ENST00000553642 175 ntBASIC2.05□□□□□ -2.08
SDC1P18827 AGGF1P4-201ENST00000568249 801 ntBASIC2.05□□□□□ -2.08
SDC1P18827 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.05□□□□□ -2.08
SDC1P18827 AC009233.1-201ENST00000616477 371 ntBASIC2.05□□□□□ -2.08
SDC1P18827 Z69720.2-201ENST00000624755 279 ntBASIC2.05□□□□□ -2.08
SDC1P18827 AP003400.5-201ENST00000624827 617 ntBASIC2.05□□□□□ -2.08
SDC1P18827 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.05□□□□□ -2.08
SDC1P18827 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SDC1P18827 RNU6-487P-201ENST00000365430 104 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms