Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 BX284668.6-201ENST00000606899 438 ntBASIC-0.51□□□□□ -2.49
VCANP13611 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.51□□□□□ -2.49
VCANP13611 RPS3AP1-201ENST00000413190 320 ntBASIC-0.51□□□□□ -2.49
VCANP13611 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.51□□□□□ -2.49
VCANP13611 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.51□□□□□ -2.49
VCANP13611 AC109327.2-201ENST00000448339 378 ntBASIC-0.51□□□□□ -2.49
VCANP13611 AC112492.4-201ENST00000456549 352 ntBASIC-0.51□□□□□ -2.49
VCANP13611 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.51□□□□□ -2.49
VCANP13611 AC023442.1-201ENST00000531247 422 ntBASIC-0.51□□□□□ -2.49
VCANP13611 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC-0.52□□□□□ -2.49
VCANP13611 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC-0.52□□□□□ -2.49
VCANP13611 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC-0.52□□□□□ -2.49
VCANP13611 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.52□□□□□ -2.49
VCANP13611 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.52□□□□□ -2.49
VCANP13611 MTND5P33-201ENST00000571250 1450 ntBASIC-0.52□□□□□ -2.49
VCANP13611 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
VCANP13611 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
VCANP13611 RNU6-284P-201ENST00000411105 106 ntBASIC-0.52□□□□□ -2.49
VCANP13611 AC092809.3-201ENST00000415453 231 ntBASIC-0.52□□□□□ -2.49
VCANP13611 MTND1P22-201ENST00000510572 951 ntBASIC-0.52□□□□□ -2.49
VCANP13611 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
VCANP13611 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.52□□□□□ -2.49
VCANP13611 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.52□□□□□ -2.49
VCANP13611 CYP3A52P-201ENST00000563326 91 ntBASIC-0.52□□□□□ -2.49
VCANP13611 AC090578.1-201ENST00000604955 591 ntBASIC-0.52□□□□□ -2.49
VCANP13611 AC010738.1-201ENST00000604970 987 ntBASIC-0.52□□□□□ -2.49
VCANP13611 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.52□□□□□ -2.49
VCANP13611 SNORA68.1-201ENST00000364537 132 ntBASIC-0.53□□□□□ -2.49
VCANP13611 AC013267.1-201ENST00000458227 267 ntBASIC-0.53□□□□□ -2.49
VCANP13611 AC010376.1-201ENST00000522101 334 ntBASIC-0.53□□□□□ -2.49
VCANP13611 AP002004.2-201ENST00000531656 154 ntBASIC-0.53□□□□□ -2.49
VCANP13611 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.53□□□□□ -2.49
VCANP13611 RNY4P36-201ENST00000391116 96 ntBASIC-0.53□□□□□ -2.49
VCANP13611 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC-0.53□□□□□ -2.49
VCANP13611 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.53□□□□□ -2.49
VCANP13611 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC-0.53□□□□□ -2.49
VCANP13611 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.53□□□□□ -2.49
VCANP13611 AC091021.1-201ENST00000468051 388 ntBASIC-0.53□□□□□ -2.49
VCANP13611 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.53□□□□□ -2.49
VCANP13611 AC027288.2-201ENST00000553028 243 ntBASIC-0.53□□□□□ -2.49
VCANP13611 BPTFP1-201ENST00000579209 492 ntBASIC-0.53□□□□□ -2.49
VCANP13611 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC-0.53□□□□□ -2.49
VCANP13611 AC110792.4-201ENST00000609843 298 ntBASIC-0.53□□□□□ -2.49
VCANP13611 SNORD114-12-201ENST00000365400 75 ntBASIC-0.54□□□□□ -2.5
VCANP13611 AC073261.1-201ENST00000429409 121 ntBASIC-0.54□□□□□ -2.5
VCANP13611 MTCO3P43-201ENST00000440974 771 ntBASIC-0.54□□□□□ -2.5
VCANP13611 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.54□□□□□ -2.5
VCANP13611 RNU6-1334P-201ENST00000516032 105 ntBASIC-0.54□□□□□ -2.5
VCANP13611 AC099842.1-201ENST00000619919 596 ntBASIC-0.54□□□□□ -2.5
VCANP13611 CR848007.1-201ENST00000442354 1699 ntBASIC-0.54□□□□□ -2.5
VCANP13611 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
VCANP13611 HMGN2P39-201ENST00000398005 273 ntBASIC-0.54□□□□□ -2.5
VCANP13611 RPL26P27-201ENST00000414397 437 ntBASIC-0.54□□□□□ -2.5
VCANP13611 USP9YP18-201ENST00000425912 695 ntBASIC-0.54□□□□□ -2.5
VCANP13611 CYB5AP5-201ENST00000549779 389 ntBASIC-0.54□□□□□ -2.5
VCANP13611 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
VCANP13611 AL359697.1-201ENST00000624879 587 ntBASIC-0.54□□□□□ -2.5
VCANP13611 RNU6-24P-201ENST00000384440 107 ntBASIC-0.54□□□□□ -2.5
VCANP13611 SNORD83B-201ENST00000386745 93 ntBASIC-0.54□□□□□ -2.5
VCANP13611 SNORD12-201ENST00000391002 90 ntBASIC-0.54□□□□□ -2.5
VCANP13611 DAP3P1-201ENST00000441522 278 ntBASIC-0.54□□□□□ -2.5
VCANP13611 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC-0.54□□□□□ -2.5
VCANP13611 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.54□□□□□ -2.5
VCANP13611 SNORD4A-201ENST00000459174 72 ntBASIC-0.54□□□□□ -2.5
VCANP13611 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.54□□□□□ -2.5
VCANP13611 AC022690.1-201ENST00000526681 550 ntBASIC-0.54□□□□□ -2.5
VCANP13611 AP003034.1-201ENST00000534621 422 ntBASIC-0.54□□□□□ -2.5
VCANP13611 AC022960.3-201ENST00000619794 441 ntBASIC-0.54□□□□□ -2.5
VCANP13611 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
VCANP13611 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.55□□□□□ -2.5
VCANP13611 MIR325-201ENST00000385260 98 ntBASIC-0.55□□□□□ -2.5
VCANP13611 RNU2-3P-201ENST00000410144 191 ntBASIC-0.55□□□□□ -2.5
VCANP13611 RNU2-7P-201ENST00000410794 178 ntBASIC-0.55□□□□□ -2.5
VCANP13611 RNA5SP112-201ENST00000515937 99 ntBASIC-0.55□□□□□ -2.5
VCANP13611 RNA5SP255-201ENST00000516370 107 ntBASIC-0.55□□□□□ -2.5
VCANP13611 AC064807.4-201ENST00000607201 407 ntBASIC-0.55□□□□□ -2.5
VCANP13611 AC010809.3-201ENST00000621310 641 ntBASIC-0.55□□□□□ -2.5
VCANP13611 EDDM3CP-201ENST00000415977 425 ntBASIC-0.55□□□□□ -2.5
VCANP13611 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC-0.55□□□□□ -2.5
VCANP13611 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC-0.55□□□□□ -2.5
VCANP13611 PDCD5P2-201ENST00000507570 312 ntBASIC-0.55□□□□□ -2.5
VCANP13611 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.55□□□□□ -2.5
VCANP13611 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.55□□□□□ -2.5
VCANP13611 CIR1P1-201ENST00000524055 1133 ntBASIC-0.55□□□□□ -2.5
VCANP13611 AC022523.2-201ENST00000561045 150 ntBASIC-0.55□□□□□ -2.5
VCANP13611 MIR8074-201ENST00000615081 81 ntBASIC-0.55□□□□□ -2.5
VCANP13611 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.55□□□□□ -2.5
VCANP13611 RNY4P28-201ENST00000365281 93 ntBASIC-0.56□□□□□ -2.5
VCANP13611 U3.20-201ENST00000390909 217 ntBASIC-0.56□□□□□ -2.5
VCANP13611 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC-0.56□□□□□ -2.5
VCANP13611 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC-0.56□□□□□ -2.5
VCANP13611 AP001324.2-201ENST00000461163 319 ntBASIC-0.56□□□□□ -2.5
VCANP13611 AC114755.3-201ENST00000481111 251 ntBASIC-0.56□□□□□ -2.5
VCANP13611 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.56□□□□□ -2.5
VCANP13611 RN7SKP19-201ENST00000516016 252 ntBASIC-0.56□□□□□ -2.5
VCANP13611 NRON-201ENST00000517270 370 ntBASIC-0.56□□□□□ -2.5
VCANP13611 MTCYBP41-201ENST00000528913 1123 ntBASIC-0.56□□□□□ -2.5
VCANP13611 AC025678.1-201ENST00000567861 338 ntBASIC-0.56□□□□□ -2.5
VCANP13611 AC011921.3-201ENST00000605540 361 ntBASIC-0.56□□□□□ -2.5
VCANP13611 AC019226.1-201ENST00000625666 515 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms