Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RBBP8P1-201ENST00000449447 1844 ntBASIC4.42□□□□□ -1.7
RARAP10276 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RARAP10276 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.42□□□□□ -1.7
RARAP10276 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RARAP10276 RNU1-14P-201ENST00000362759 152 ntBASIC4.41□□□□□ -1.7
RARAP10276 SNORD56.1-201ENST00000362913 68 ntBASIC4.41□□□□□ -1.7
RARAP10276 RNU6-778P-201ENST00000363269 103 ntBASIC4.41□□□□□ -1.7
RARAP10276 U3.22-201ENST00000391120 215 ntBASIC4.41□□□□□ -1.7
RARAP10276 AC024067.1-201ENST00000426199 223 ntBASIC4.41□□□□□ -1.7
RARAP10276 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.41□□□□□ -1.7
RARAP10276 RN7SL738P-201ENST00000470264 297 ntBASIC4.41□□□□□ -1.7
RARAP10276 AC097462.2-201ENST00000504623 481 ntBASIC4.41□□□□□ -1.7
RARAP10276 AC020593.1-201ENST00000507399 299 ntBASIC4.41□□□□□ -1.7
RARAP10276 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.41□□□□□ -1.7
RARAP10276 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.41□□□□□ -1.7
RARAP10276 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.41□□□□□ -1.7
RARAP10276 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.41□□□□□ -1.7
RARAP10276 AC136624.4-201ENST00000573044 370 ntBASIC4.41□□□□□ -1.7
RARAP10276 AL138963.2-201ENST00000605137 226 ntBASIC4.41□□□□□ -1.7
RARAP10276 AL357075.2-201ENST00000614906 189 ntBASIC4.41□□□□□ -1.7
RARAP10276 AC010733.2-201ENST00000589496 5702 ntBASIC4.41□□□□□ -1.7
RARAP10276 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.41□□□□□ -1.7
RARAP10276 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RARAP10276 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RARAP10276 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RARAP10276 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
RARAP10276 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RARAP10276 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.4□□□□□ -1.7
RARAP10276 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.4□□□□□ -1.7
RARAP10276 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RARAP10276 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RARAP10276 RNA5SP502-201ENST00000362694 119 ntBASIC4.4□□□□□ -1.71
RARAP10276 RNU6-1130P-201ENST00000365434 107 ntBASIC4.4□□□□□ -1.71
RARAP10276 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RARAP10276 RNU6-22P-201ENST00000384355 107 ntBASIC4.4□□□□□ -1.71
RARAP10276 Y_RNA.580-201ENST00000391004 95 ntBASIC4.4□□□□□ -1.71
RARAP10276 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.4□□□□□ -1.71
RARAP10276 AL358075.3-201ENST00000426289 226 ntBASIC4.4□□□□□ -1.71
RARAP10276 AC068287.1-201ENST00000430283 295 ntBASIC4.4□□□□□ -1.71
RARAP10276 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.4□□□□□ -1.71
RARAP10276 GPM6BP3-201ENST00000442797 145 ntBASIC4.4□□□□□ -1.71
RARAP10276 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.4□□□□□ -1.71
RARAP10276 TPT1P12-201ENST00000448968 492 ntBASIC4.4□□□□□ -1.71
RARAP10276 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.4□□□□□ -1.71
RARAP10276 RN7SL459P-201ENST00000481078 302 ntBASIC4.4□□□□□ -1.71
RARAP10276 RNA5SP49-201ENST00000516450 115 ntBASIC4.4□□□□□ -1.71
RARAP10276 RNA5SP519-201ENST00000516480 119 ntBASIC4.4□□□□□ -1.71
RARAP10276 RNU6-1198P-201ENST00000516904 67 ntBASIC4.4□□□□□ -1.71
RARAP10276 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RARAP10276 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.4□□□□□ -1.71
RARAP10276 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.4□□□□□ -1.71
RARAP10276 MIR5692C2-201ENST00000577959 77 ntBASIC4.4□□□□□ -1.71
RARAP10276 MIR4330-201ENST00000579077 105 ntBASIC4.4□□□□□ -1.71
RARAP10276 AC008745.1-201ENST00000604064 271 ntBASIC4.4□□□□□ -1.71
RARAP10276 AC022441.3-201ENST00000605737 136 ntBASIC4.4□□□□□ -1.71
RARAP10276 FTX_3.1-201ENST00000610451 147 ntBASIC4.4□□□□□ -1.71
RARAP10276 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.4□□□□□ -1.71
RARAP10276 MTND1P7-201ENST00000632801 297 ntBASIC4.4□□□□□ -1.71
RARAP10276 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.4□□□□□ -1.71
RARAP10276 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.4□□□□□ -1.71
RARAP10276 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RARAP10276 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RARAP10276 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RARAP10276 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RARAP10276 AL109809.4-201ENST00000603520 2185 ntBASIC4.4□□□□□ -1.71
RARAP10276 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RARAP10276 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RARAP10276 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
RARAP10276 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
RARAP10276 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.39□□□□□ -1.71
RARAP10276 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.39□□□□□ -1.71
RARAP10276 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RARAP10276 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RARAP10276 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.39□□□□□ -1.71
RARAP10276 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RARAP10276 RNU6-653P-201ENST00000363074 106 ntBASIC4.39□□□□□ -1.71
RARAP10276 RNU1-132P-201ENST00000364300 164 ntBASIC4.39□□□□□ -1.71
RARAP10276 Y_RNA.272-201ENST00000364696 102 ntBASIC4.39□□□□□ -1.71
RARAP10276 SNORD116-18-201ENST00000383961 92 ntBASIC4.39□□□□□ -1.71
RARAP10276 MIR23B-201ENST00000384832 97 ntBASIC4.39□□□□□ -1.71
RARAP10276 MIR1179-201ENST00000408703 91 ntBASIC4.39□□□□□ -1.71
RARAP10276 AC245028.1-201ENST00000423259 256 ntBASIC4.39□□□□□ -1.71
RARAP10276 AL512844.2-201ENST00000433990 593 ntBASIC4.39□□□□□ -1.71
RARAP10276 AC005042.3-201ENST00000453230 174 ntBASIC4.39□□□□□ -1.71
RARAP10276 AC011276.1-201ENST00000469688 323 ntBASIC4.39□□□□□ -1.71
RARAP10276 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RARAP10276 RPS29P19-201ENST00000479709 171 ntBASIC4.39□□□□□ -1.71
RARAP10276 RPS4XP22-201ENST00000480755 780 ntBASIC4.39□□□□□ -1.71
RARAP10276 AL592156.1-201ENST00000508758 304 ntBASIC4.39□□□□□ -1.71
RARAP10276 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.39□□□□□ -1.71
RARAP10276 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.39□□□□□ -1.71
RARAP10276 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.39□□□□□ -1.71
RARAP10276 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RARAP10276 HSPE1P4-201ENST00000550617 308 ntBASIC4.39□□□□□ -1.71
RARAP10276 AC055872.1-201ENST00000570978 278 ntBASIC4.39□□□□□ -1.71
RARAP10276 AC019159.1-201ENST00000605094 187 ntBASIC4.39□□□□□ -1.71
RARAP10276 AL356218.2-201ENST00000605264 187 ntBASIC4.39□□□□□ -1.71
RARAP10276 FAM27D1-201ENST00000612308 341 ntBASIC4.39□□□□□ -1.71
RARAP10276 AC048347.1-201ENST00000624621 427 ntBASIC4.39□□□□□ -1.71
RARAP10276 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms