Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.75□□□□□ -2.29
FREM3P0C091 AC021146.2-201ENST00000504736 556 ntBASIC0.75□□□□□ -2.29
FREM3P0C091 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.75□□□□□ -2.29
FREM3P0C091 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.75□□□□□ -2.29
FREM3P0C091 RNU6-1102P-201ENST00000516149 96 ntBASIC0.75□□□□□ -2.29
FREM3P0C091 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
FREM3P0C091 AL136520.1-202ENST00000555494 763 ntBASIC0.75□□□□□ -2.29
FREM3P0C091 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
FREM3P0C091 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.75□□□□□ -2.29
FREM3P0C091 RNU5B-1-201ENST00000363286 116 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AL139397.2-201ENST00000404529 772 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 RNA5SP100-201ENST00000410903 110 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 RNA5SP59-201ENST00000410922 110 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AC068533.2-201ENST00000411872 306 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 EBAG9P1-201ENST00000418955 543 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.74□□□□□ -2.29
FREM3P0C091 AC112492.4-201ENST00000456549 352 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.74□□□□□ -2.29
FREM3P0C091 RNY4P37-201ENST00000516225 96 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 RNU6-572P-201ENST00000516724 80 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AC022616.8-201ENST00000533569 253 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AP000763.2-201ENST00000540641 163 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AC005668.1-201ENST00000571142 476 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 RN7SL793P-201ENST00000583259 296 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.74□□□□□ -2.29
FREM3P0C091 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 LINC02555-201ENST00000563933 1951 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
FREM3P0C091 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
FREM3P0C091 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
FREM3P0C091 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.74□□□□□ -2.29
FREM3P0C091 AC114801.2-201ENST00000503825 781 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AC114981.1-201ENST00000503897 678 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AC079140.2-201ENST00000506193 142 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.74□□□□□ -2.29
FREM3P0C091 AC009902.1-201ENST00000519351 183 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AC087854.1-201ENST00000519706 414 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.74□□□□□ -2.29
FREM3P0C091 DEFB131D-201ENST00000526803 184 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.74□□□□□ -2.29
FREM3P0C091 HSPE1P4-201ENST00000550617 308 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AL157871.3-201ENST00000557231 293 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.74□□□□□ -2.29
FREM3P0C091 AL358072.1-201ENST00000604156 575 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 AP001485.1-201ENST00000604799 199 ntBASIC0.74□□□□□ -2.29
FREM3P0C091 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.73□□□□□ -2.29
FREM3P0C091 snoU2_19.1-201ENST00000362361 80 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 RNU6-1210P-201ENST00000363775 107 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 Y_RNA.295-201ENST00000364918 102 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 RNU6-744P-201ENST00000365557 107 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 RNU6-1316P-201ENST00000384242 108 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 TIMM9P2-201ENST00000419324 266 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.73□□□□□ -2.29
FREM3P0C091 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.73□□□□□ -2.29
FREM3P0C091 USP9YP17-201ENST00000444617 696 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.73□□□□□ -2.29
FREM3P0C091 AC010631.1-201ENST00000474150 156 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.73□□□□□ -2.29
FREM3P0C091 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.73□□□□□ -2.29
FREM3P0C091 AP003034.1-201ENST00000534621 422 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 AC021171.1-201ENST00000603137 706 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 AL132822.1-201ENST00000617063 513 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 AC007792.1-201ENST00000623023 402 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 AP003485.1-201ENST00000625093 753 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.73□□□□□ -2.29
FREM3P0C091 DDX43P2-201ENST00000604753 1354 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 RNU6-792P-201ENST00000363490 107 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 RNU6-289P-201ENST00000364093 107 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 RNU6-853P-201ENST00000364306 107 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 RNU6-354P-201ENST00000383862 107 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 RNU6-701P-201ENST00000384059 107 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 RNU6-610P-201ENST00000384264 107 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 MIR1197-201ENST00000408818 88 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
FREM3P0C091 AL358176.2-201ENST00000425769 204 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 RPL17P35-201ENST00000432217 549 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 MTCO1P44-201ENST00000441935 243 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 AL035666.1-201ENST00000446195 348 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 ZNF886P-201ENST00000450781 723 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.73□□□□□ -2.29
FREM3P0C091 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.73□□□□□ -2.29
FREM3P0C091 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.73□□□□□ -2.29
FREM3P0C091 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.73□□□□□ -2.29
FREM3P0C091 AC136618.2-201ENST00000575091 400 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 MIR1273G-201ENST00000577677 100 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 uc_338.15-201ENST00000615470 191 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
FREM3P0C091 AC130454.1-201ENST00000622948 401 ntBASIC0.73□□□□□ -2.29
FREM3P0C091 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.72□□□□□ -2.29
FREM3P0C091 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
FREM3P0C091 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
FREM3P0C091 Y_RNA.30-201ENST00000362572 97 ntBASIC0.72□□□□□ -2.29
FREM3P0C091 RNU6-1010P-201ENST00000362757 107 ntBASIC0.72□□□□□ -2.29
FREM3P0C091 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.72□□□□□ -2.29
FREM3P0C091 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.72□□□□□ -2.29
FREM3P0C091 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms