Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU6-946P-201ENST00000383878 107 ntBASIC1.35□□□□□ -2.19
TPM1P09493 AC069282.1-201ENST00000411911 526 ntBASIC1.35□□□□□ -2.19
TPM1P09493 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.35□□□□□ -2.19
TPM1P09493 AL365400.1-201ENST00000431854 640 ntBASIC1.35□□□□□ -2.19
TPM1P09493 MTND2P4-201ENST00000445034 1004 ntBASIC1.35□□□□□ -2.19
TPM1P09493 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.35□□□□□ -2.19
TPM1P09493 AC068587.4-201ENST00000533893 186 ntBASIC1.35□□□□□ -2.19
TPM1P09493 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.35□□□□□ -2.19
TPM1P09493 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.35□□□□□ -2.19
TPM1P09493 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.35□□□□□ -2.19
TPM1P09493 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.35□□□□□ -2.19
TPM1P09493 AL606834.3-201ENST00000602615 496 ntBASIC1.35□□□□□ -2.19
TPM1P09493 AL138889.2-201ENST00000603883 242 ntBASIC1.35□□□□□ -2.19
TPM1P09493 AC091965.4-201ENST00000607691 587 ntBASIC1.35□□□□□ -2.19
TPM1P09493 AC063943.3-201ENST00000615562 356 ntBASIC1.35□□□□□ -2.19
TPM1P09493 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.35□□□□□ -2.19
TPM1P09493 SCARNA4-202ENST00000625402 129 ntBASIC1.35□□□□□ -2.19
TPM1P09493 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TPM1P09493 AP000560.1-201ENST00000624150 1937 ntBASIC1.34□□□□□ -2.19
TPM1P09493 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
TPM1P09493 OR4G2P-201ENST00000328113 903 ntBASIC1.34□□□□□ -2.19
TPM1P09493 SNORD3E-201ENST00000362899 217 ntBASIC1.34□□□□□ -2.19
TPM1P09493 RNU6-112P-201ENST00000363599 104 ntBASIC1.34□□□□□ -2.19
TPM1P09493 RNU5E-6P-201ENST00000365574 115 ntBASIC1.34□□□□□ -2.19
TPM1P09493 RNU6-723P-201ENST00000383973 107 ntBASIC1.34□□□□□ -2.19
TPM1P09493 AL136310.1-201ENST00000404926 654 ntBASIC1.34□□□□□ -2.19
TPM1P09493 MTCYBP5-201ENST00000423752 1135 ntBASIC1.34□□□□□ -2.19
TPM1P09493 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.34□□□□□ -2.19
TPM1P09493 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.34□□□□□ -2.19
TPM1P09493 HMGB1P31-201ENST00000437242 427 ntBASIC1.34□□□□□ -2.19
TPM1P09493 RPS29P28-201ENST00000446439 141 ntBASIC1.34□□□□□ -2.19
TPM1P09493 AC079448.1-201ENST00000449377 373 ntBASIC1.34□□□□□ -2.19
TPM1P09493 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.34□□□□□ -2.19
TPM1P09493 RNU6-333P-201ENST00000459117 107 ntBASIC1.34□□□□□ -2.19
TPM1P09493 MIR3146-201ENST00000580367 79 ntBASIC1.34□□□□□ -2.19
TPM1P09493 AC112220.3-201ENST00000605502 502 ntBASIC1.34□□□□□ -2.19
TPM1P09493 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.34□□□□□ -2.19
TPM1P09493 PART1_2.1-201ENST00000612397 250 ntBASIC1.34□□□□□ -2.19
TPM1P09493 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.34□□□□□ -2.2
TPM1P09493 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
TPM1P09493 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TPM1P09493 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TPM1P09493 MIR302D-201ENST00000362275 68 ntBASIC1.33□□□□□ -2.2
TPM1P09493 SNORD114-6-201ENST00000364393 72 ntBASIC1.33□□□□□ -2.2
TPM1P09493 RNU6-1257P-201ENST00000384625 110 ntBASIC1.33□□□□□ -2.2
TPM1P09493 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
TPM1P09493 MIR10A-201ENST00000385043 110 ntBASIC1.33□□□□□ -2.2
TPM1P09493 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
TPM1P09493 MIR1285-1-201ENST00000408593 84 ntBASIC1.33□□□□□ -2.2
TPM1P09493 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.33□□□□□ -2.2
TPM1P09493 AC006026.2-201ENST00000457376 180 ntBASIC1.33□□□□□ -2.2
TPM1P09493 AC130509.1-201ENST00000464158 433 ntBASIC1.33□□□□□ -2.2
TPM1P09493 HMGN1P13-201ENST00000505795 138 ntBASIC1.33□□□□□ -2.2
TPM1P09493 AC009646.1-201ENST00000510455 318 ntBASIC1.33□□□□□ -2.2
TPM1P09493 AC010587.2-201ENST00000511727 448 ntBASIC1.33□□□□□ -2.2
TPM1P09493 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.33□□□□□ -2.2
TPM1P09493 AP000860.1-201ENST00000605250 559 ntBASIC1.33□□□□□ -2.2
TPM1P09493 uc_338.12-201ENST00000616344 181 ntBASIC1.33□□□□□ -2.2
TPM1P09493 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.33□□□□□ -2.2
TPM1P09493 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TPM1P09493 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
TPM1P09493 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TPM1P09493 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TPM1P09493 SNORD14B-201ENST00000364533 90 ntBASIC1.32□□□□□ -2.2
TPM1P09493 SNORD1A-201ENST00000364968 72 ntBASIC1.32□□□□□ -2.2
TPM1P09493 Y_RNA.465-201ENST00000384293 102 ntBASIC1.32□□□□□ -2.2
TPM1P09493 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.32□□□□□ -2.2
TPM1P09493 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.32□□□□□ -2.2
TPM1P09493 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.32□□□□□ -2.2
TPM1P09493 RPS27P16-201ENST00000425758 201 ntBASIC1.32□□□□□ -2.2
TPM1P09493 AL669831.1-202ENST00000428504 417 ntBASIC1.32□□□□□ -2.2
TPM1P09493 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.32□□□□□ -2.2
TPM1P09493 UBE2V1P8-201ENST00000437166 265 ntBASIC1.32□□□□□ -2.2
TPM1P09493 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.32□□□□□ -2.2
TPM1P09493 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.32□□□□□ -2.2
TPM1P09493 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
TPM1P09493 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
TPM1P09493 Y_RNA.689-201ENST00000516589 107 ntBASIC1.32□□□□□ -2.2
TPM1P09493 AC010376.1-201ENST00000522101 334 ntBASIC1.32□□□□□ -2.2
TPM1P09493 AC087441.2-201ENST00000529141 262 ntBASIC1.32□□□□□ -2.2
TPM1P09493 RRN3P3-201ENST00000549207 578 ntBASIC1.32□□□□□ -2.2
TPM1P09493 RPL21P5-201ENST00000554662 472 ntBASIC1.32□□□□□ -2.2
TPM1P09493 AC019288.1-201ENST00000557918 224 ntBASIC1.32□□□□□ -2.2
TPM1P09493 AC027807.1-201ENST00000559921 996 ntBASIC1.32□□□□□ -2.2
TPM1P09493 AC012414.6-201ENST00000568241 401 ntBASIC1.32□□□□□ -2.2
TPM1P09493 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.32□□□□□ -2.2
TPM1P09493 AL353778.1-201ENST00000603149 408 ntBASIC1.32□□□□□ -2.2
TPM1P09493 AP000654.2-201ENST00000605633 586 ntBASIC1.32□□□□□ -2.2
TPM1P09493 AC022513.1-201ENST00000624512 117 ntBASIC1.32□□□□□ -2.2
TPM1P09493 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
TPM1P09493 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.32□□□□□ -2.2
TPM1P09493 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.31□□□□□ -2.2
TPM1P09493 RNU6-960P-201ENST00000364056 120 ntBASIC1.31□□□□□ -2.2
TPM1P09493 SNORA62.1-201ENST00000364287 154 ntBASIC1.31□□□□□ -2.2
TPM1P09493 AL357139.1-201ENST00000407792 426 ntBASIC1.31□□□□□ -2.2
TPM1P09493 AC139712.2-201ENST00000424302 339 ntBASIC1.31□□□□□ -2.2
TPM1P09493 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.31□□□□□ -2.2
TPM1P09493 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.31□□□□□ -2.2
TPM1P09493 AL135790.2-201ENST00000437701 267 ntBASIC1.31□□□□□ -2.2
TPM1P09493 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms