Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.68□□□□□ -2.3
CXCL1P09341 MIR3945-201ENST00000581853 98 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 AC098483.2-201ENST00000603158 454 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 AL020996.3-201ENST00000606617 222 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 AC004492.1-201ENST00000607036 742 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CXCL1P09341 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.68□□□□□ -2.3
CXCL1P09341 AL157834.3-201ENST00000615543 103 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 AC112204.3-201ENST00000623822 332 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 AC068700.1-201ENST00000565862 3754 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 LINC02555-201ENST00000563933 1951 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 RNU6-853P-201ENST00000364306 107 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 Y_RNA.597-201ENST00000410463 100 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 RNU6-1025P-201ENST00000410629 104 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 RN7SKP61-201ENST00000410642 295 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 POLR2J4-204ENST00000418424 324 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 EBAG9P1-201ENST00000418955 543 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.67□□□□□ -2.3
CXCL1P09341 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.67□□□□□ -2.3
CXCL1P09341 HSPE1P9-201ENST00000440046 311 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 KATNBL1P3-201ENST00000443475 909 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.67□□□□□ -2.3
CXCL1P09341 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.67□□□□□ -2.3
CXCL1P09341 RNU6-1092P-201ENST00000516955 87 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 AC019176.1-201ENST00000518519 225 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.67□□□□□ -2.3
CXCL1P09341 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.67□□□□□ -2.3
CXCL1P09341 AL157871.3-201ENST00000557231 293 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 AC092325.1-201ENST00000566449 554 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 MTATP6P25-201ENST00000574491 261 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 MIR1273C-201ENST00000578669 77 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 AC007363.1-201ENST00000604736 620 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 AP000654.2-201ENST00000605633 586 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CXCL1P09341 AL159153.1-201ENST00000619688 317 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 AL589994.2-201ENST00000621124 579 ntBASIC0.67□□□□□ -2.3
CXCL1P09341 SNORD114-2-201ENST00000363953 78 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 RNU6-289P-201ENST00000364093 107 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 RNU1-36P-201ENST00000365130 165 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 Y_RNA.332-201ENST00000365271 113 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.66□□□□□ -2.3
CXCL1P09341 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.66□□□□□ -2.3
CXCL1P09341 RNU6-701P-201ENST00000384059 107 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 MIR520A-201ENST00000384862 85 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 MIR532-201ENST00000385025 91 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 AL357139.1-201ENST00000407792 426 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 SNORA11.2-201ENST00000408318 127 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 RNU4-62P-201ENST00000410125 130 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.66□□□□□ -2.3
CXCL1P09341 RPS27P1-201ENST00000450552 247 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.66□□□□□ -2.3
CXCL1P09341 AC134050.1-201ENST00000495088 933 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
CXCL1P09341 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.66□□□□□ -2.3
CXCL1P09341 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.66□□□□□ -2.3
CXCL1P09341 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.66□□□□□ -2.3
CXCL1P09341 AL512310.8-201ENST00000550183 120 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 MTCYBP33-201ENST00000575007 1130 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 MIR5094-201ENST00000578766 85 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 MIR4661-201ENST00000582720 75 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 AC078795.2-201ENST00000602835 1252 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 AL391646.1-201ENST00000603860 190 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 RPL21P136-201ENST00000605378 396 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 AL391813.2-201ENST00000609113 322 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.66□□□□□ -2.3
CXCL1P09341 AC009033.1-201ENST00000624279 431 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 AC095038.3-201ENST00000634439 195 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CXCL1P09341 MTND5P42-201ENST00000637720 498 ntBASIC0.66□□□□□ -2.3
CXCL1P09341 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
CXCL1P09341 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CXCL1P09341 Y_RNA.33-201ENST00000362591 102 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 SNORA25-201ENST00000384384 134 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
CXCL1P09341 RPL23AP32-201ENST00000395315 459 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 AC069282.1-201ENST00000411911 526 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.65□□□□□ -2.31
CXCL1P09341 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.65□□□□□ -2.31
CXCL1P09341 RPL21P111-201ENST00000418453 477 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 RPS4XP11-201ENST00000446897 772 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 AP000542.1-201ENST00000448473 371 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 PAXBP1P1-201ENST00000449315 447 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.65□□□□□ -2.31
CXCL1P09341 RNA5SP481-201ENST00000516814 122 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.65□□□□□ -2.31
CXCL1P09341 AC025678.1-201ENST00000567861 338 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 AC136932.1-201ENST00000574771 208 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.65□□□□□ -2.31
CXCL1P09341 AC112220.2-201ENST00000605513 533 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.65□□□□□ -2.31
CXCL1P09341 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 AC007792.1-201ENST00000623023 402 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 AL136313.1-201ENST00000624804 202 ntBASIC0.65□□□□□ -2.31
CXCL1P09341 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.65□□□□□ -2.31
CXCL1P09341 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.31
CXCL1P09341 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CXCL1P09341 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 RNU4-51P-201ENST00000364206 140 ntBASIC0.64□□□□□ -2.31
CXCL1P09341 snoZ40.1-201ENST00000364540 72 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms