Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TPRKBP2-201ENST00000565969 475 ntBASIC2.78□□□□□ -1.96
RB1P06400 AC009163.5-201ENST00000575421 637 ntBASIC2.78□□□□□ -1.96
RB1P06400 MIR4648-201ENST00000580107 72 ntBASIC2.78□□□□□ -1.96
RB1P06400 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.78□□□□□ -1.96
RB1P06400 AC138627.2-201ENST00000624202 601 ntBASIC2.78□□□□□ -1.96
RB1P06400 AC010329.5-201ENST00000623497 2174 ntBASIC2.78□□□□□ -1.96
RB1P06400 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.78□□□□□ -1.96
RB1P06400 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RB1P06400 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.77□□□□□ -1.97
RB1P06400 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.77□□□□□ -1.97
RB1P06400 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
RB1P06400 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.77□□□□□ -1.97
RB1P06400 Y_RNA.324-201ENST00000365165 102 ntBASIC2.77□□□□□ -1.97
RB1P06400 RNU6-483P-201ENST00000384088 108 ntBASIC2.77□□□□□ -1.97
RB1P06400 AL590002.1-201ENST00000406554 418 ntBASIC2.77□□□□□ -1.97
RB1P06400 RNU6-1328P-201ENST00000410938 106 ntBASIC2.77□□□□□ -1.97
RB1P06400 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.77□□□□□ -1.97
RB1P06400 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.77□□□□□ -1.97
RB1P06400 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.77□□□□□ -1.97
RB1P06400 SEPT14P3-201ENST00000439401 183 ntBASIC2.77□□□□□ -1.97
RB1P06400 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.77□□□□□ -1.97
RB1P06400 AL732372.2-207ENST00000445840 183 ntBASIC2.77□□□□□ -1.97
RB1P06400 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RB1P06400 SEPT14P2-201ENST00000453405 183 ntBASIC2.77□□□□□ -1.97
RB1P06400 RNU7-167P-201ENST00000459160 62 ntBASIC2.77□□□□□ -1.97
RB1P06400 AC079140.5-201ENST00000507882 310 ntBASIC2.77□□□□□ -1.97
RB1P06400 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.77□□□□□ -1.97
RB1P06400 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.77□□□□□ -1.97
RB1P06400 SEPT14P4-201ENST00000513445 186 ntBASIC2.77□□□□□ -1.97
RB1P06400 RN7SKP24-201ENST00000515888 284 ntBASIC2.77□□□□□ -1.97
RB1P06400 RNA5SP320-201ENST00000516263 124 ntBASIC2.77□□□□□ -1.97
RB1P06400 SNORA9.3-201ENST00000516383 129 ntBASIC2.77□□□□□ -1.97
RB1P06400 FO082796.1-201ENST00000523795 183 ntBASIC2.77□□□□□ -1.97
RB1P06400 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.77□□□□□ -1.97
RB1P06400 AC243972.3-201ENST00000539655 198 ntBASIC2.77□□□□□ -1.97
RB1P06400 AL157687.1-201ENST00000554853 619 ntBASIC2.77□□□□□ -1.97
RB1P06400 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.77□□□□□ -1.97
RB1P06400 MIR3941-201ENST00000582572 103 ntBASIC2.77□□□□□ -1.97
RB1P06400 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.77□□□□□ -1.97
RB1P06400 AL162413.1-201ENST00000603198 110 ntBASIC2.77□□□□□ -1.97
RB1P06400 AP000787.2-201ENST00000604432 568 ntBASIC2.77□□□□□ -1.97
RB1P06400 U2.17-201ENST00000611454 95 ntBASIC2.77□□□□□ -1.97
RB1P06400 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RB1P06400 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.77□□□□□ -1.97
RB1P06400 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RB1P06400 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
RB1P06400 AL109809.4-201ENST00000603520 2185 ntBASIC2.77□□□□□ -1.97
RB1P06400 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
RB1P06400 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.77□□□□□ -1.97
RB1P06400 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RB1P06400 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.76□□□□□ -1.97
RB1P06400 AL359854.1-201ENST00000614203 1594 ntBASIC2.76□□□□□ -1.97
RB1P06400 RNA5SP289-201ENST00000362332 137 ntBASIC2.76□□□□□ -1.97
RB1P06400 AL096701.2-201ENST00000416920 238 ntBASIC2.76□□□□□ -1.97
RB1P06400 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.76□□□□□ -1.97
RB1P06400 GSTA11P-201ENST00000452866 669 ntBASIC2.76□□□□□ -1.97
RB1P06400 AC006026.2-201ENST00000457376 180 ntBASIC2.76□□□□□ -1.97
RB1P06400 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.76□□□□□ -1.97
RB1P06400 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.76□□□□□ -1.97
RB1P06400 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.76□□□□□ -1.97
RB1P06400 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.76□□□□□ -1.97
RB1P06400 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.76□□□□□ -1.97
RB1P06400 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.76□□□□□ -1.97
RB1P06400 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.76□□□□□ -1.97
RB1P06400 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RB1P06400 AC090616.3-201ENST00000582184 217 ntBASIC2.76□□□□□ -1.97
RB1P06400 MIR4765-201ENST00000585007 77 ntBASIC2.76□□□□□ -1.97
RB1P06400 AC008121.1-201ENST00000603244 268 ntBASIC2.76□□□□□ -1.97
RB1P06400 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RB1P06400 AL020991.1-201ENST00000612314 373 ntBASIC2.76□□□□□ -1.97
RB1P06400 AC107871.2-201ENST00000612894 502 ntBASIC2.76□□□□□ -1.97
RB1P06400 U4.5-201ENST00000617137 123 ntBASIC2.76□□□□□ -1.97
RB1P06400 RMST_7.1-201ENST00000621935 268 ntBASIC2.76□□□□□ -1.97
RB1P06400 YWHAEP7-203ENST00000622054 312 ntBASIC2.76□□□□□ -1.97
RB1P06400 Z69720.2-201ENST00000624755 279 ntBASIC2.76□□□□□ -1.97
RB1P06400 MIR1321-201ENST00000637766 79 ntBASIC2.76□□□□□ -1.97
RB1P06400 MTND5P30-201ENST00000452896 1731 ntBASIC2.76□□□□□ -1.97
RB1P06400 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RB1P06400 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
RB1P06400 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
RB1P06400 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RB1P06400 RNU6-266P-201ENST00000364225 107 ntBASIC2.75□□□□□ -1.97
RB1P06400 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RB1P06400 AL356320.1-201ENST00000429616 163 ntBASIC2.75□□□□□ -1.97
RB1P06400 Z98742.2-201ENST00000431564 187 ntBASIC2.75□□□□□ -1.97
RB1P06400 AL365400.1-201ENST00000431854 640 ntBASIC2.75□□□□□ -1.97
RB1P06400 MICF-203ENST00000432679 129 ntBASIC2.75□□□□□ -1.97
RB1P06400 FABP5P14-201ENST00000437273 393 ntBASIC2.75□□□□□ -1.97
RB1P06400 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.75□□□□□ -1.97
RB1P06400 DYNLL1P5-201ENST00000467158 270 ntBASIC2.75□□□□□ -1.97
RB1P06400 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RB1P06400 SNORA43.2-201ENST00000516652 128 ntBASIC2.75□□□□□ -1.97
RB1P06400 SNORA25.17-201ENST00000517184 124 ntBASIC2.75□□□□□ -1.97
RB1P06400 CR383656.8-201ENST00000549046 145 ntBASIC2.75□□□□□ -1.97
RB1P06400 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.75□□□□□ -1.97
RB1P06400 AL138976.2-201ENST00000563989 694 ntBASIC2.75□□□□□ -1.97
RB1P06400 AC002044.1-201ENST00000606707 158 ntBASIC2.75□□□□□ -1.97
RB1P06400 RNU6-91P-201ENST00000607774 107 ntBASIC2.75□□□□□ -1.97
RB1P06400 Z82243.1-201ENST00000609432 473 ntBASIC2.75□□□□□ -1.97
RB1P06400 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms