Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.62□□□□□ -2.15
CD74P04233 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CD74P04233 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CD74P04233 MIR412-201ENST00000362142 91 ntBASIC1.61□□□□□ -2.15
CD74P04233 Y_RNA.201-201ENST00000364052 96 ntBASIC1.61□□□□□ -2.15
CD74P04233 RNU6-234P-201ENST00000365229 104 ntBASIC1.61□□□□□ -2.15
CD74P04233 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CD74P04233 RNU6-116P-201ENST00000384042 109 ntBASIC1.61□□□□□ -2.15
CD74P04233 RNU6-1140P-201ENST00000410517 106 ntBASIC1.61□□□□□ -2.15
CD74P04233 RPL21P90-201ENST00000415692 466 ntBASIC1.61□□□□□ -2.15
CD74P04233 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.61□□□□□ -2.15
CD74P04233 AC096920.1-201ENST00000423991 241 ntBASIC1.61□□□□□ -2.15
CD74P04233 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.61□□□□□ -2.15
CD74P04233 AC009961.2-201ENST00000435771 251 ntBASIC1.61□□□□□ -2.15
CD74P04233 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CD74P04233 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.61□□□□□ -2.15
CD74P04233 AC012308.1-201ENST00000451232 178 ntBASIC1.61□□□□□ -2.15
CD74P04233 MTAPP1-201ENST00000489154 819 ntBASIC1.61□□□□□ -2.15
CD74P04233 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.61□□□□□ -2.15
CD74P04233 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.61□□□□□ -2.15
CD74P04233 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.61□□□□□ -2.15
CD74P04233 SNORA18.6-201ENST00000516792 115 ntBASIC1.61□□□□□ -2.15
CD74P04233 AC090572.1-201ENST00000519251 160 ntBASIC1.61□□□□□ -2.15
CD74P04233 OR5AL2P-201ENST00000532185 920 ntBASIC1.61□□□□□ -2.15
CD74P04233 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.61□□□□□ -2.15
CD74P04233 MTCYBP33-201ENST00000575007 1130 ntBASIC1.61□□□□□ -2.15
CD74P04233 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.61□□□□□ -2.15
CD74P04233 AC098848.2-201ENST00000588023 330 ntBASIC1.61□□□□□ -2.15
CD74P04233 Z84480.1-201ENST00000605131 311 ntBASIC1.61□□□□□ -2.15
CD74P04233 AC087045.1-201ENST00000605856 382 ntBASIC1.61□□□□□ -2.15
CD74P04233 Y_RNA.783-201ENST00000613546 102 ntBASIC1.61□□□□□ -2.15
CD74P04233 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
CD74P04233 AC093648.1-201ENST00000623546 606 ntBASIC1.61□□□□□ -2.15
CD74P04233 AC092656.1-203ENST00000624134 423 ntBASIC1.61□□□□□ -2.15
CD74P04233 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.61□□□□□ -2.15
CD74P04233 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CD74P04233 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CD74P04233 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.61□□□□□ -2.15
CD74P04233 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CD74P04233 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
CD74P04233 FGF7P2-201ENST00000332473 296 ntBASIC1.6□□□□□ -2.15
CD74P04233 Y_RNA.576-201ENST00000384781 102 ntBASIC1.6□□□□□ -2.15
CD74P04233 MIR504-201ENST00000385065 83 ntBASIC1.6□□□□□ -2.15
CD74P04233 MIR561-201ENST00000385216 97 ntBASIC1.6□□□□□ -2.15
CD74P04233 HMGN2P39-201ENST00000398005 273 ntBASIC1.6□□□□□ -2.15
CD74P04233 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.6□□□□□ -2.15
CD74P04233 AL031779.1-201ENST00000415663 330 ntBASIC1.6□□□□□ -2.15
CD74P04233 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.6□□□□□ -2.15
CD74P04233 AC138623.1-201ENST00000418060 216 ntBASIC1.6□□□□□ -2.15
CD74P04233 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.6□□□□□ -2.15
CD74P04233 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.6□□□□□ -2.15
CD74P04233 AC000111.3-201ENST00000433478 193 ntBASIC1.6□□□□□ -2.15
CD74P04233 AL353706.1-201ENST00000436728 494 ntBASIC1.6□□□□□ -2.15
CD74P04233 AC096638.1-201ENST00000444678 216 ntBASIC1.6□□□□□ -2.15
CD74P04233 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.6□□□□□ -2.15
CD74P04233 RPS27AP8-201ENST00000452665 445 ntBASIC1.6□□□□□ -2.15
CD74P04233 PPP1R2P5-201ENST00000457256 603 ntBASIC1.6□□□□□ -2.15
CD74P04233 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.6□□□□□ -2.15
CD74P04233 AC104806.1-201ENST00000508720 308 ntBASIC1.6□□□□□ -2.15
CD74P04233 RANP3-201ENST00000530970 276 ntBASIC1.6□□□□□ -2.15
CD74P04233 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.6□□□□□ -2.15
CD74P04233 AC243960.4-201ENST00000600532 288 ntBASIC1.6□□□□□ -2.15
CD74P04233 AC064872.1-201ENST00000604823 1072 ntBASIC1.6□□□□□ -2.15
CD74P04233 AC073114.1-201ENST00000612027 490 ntBASIC1.6□□□□□ -2.15
CD74P04233 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
CD74P04233 YWHAEP7-203ENST00000622054 312 ntBASIC1.6□□□□□ -2.15
CD74P04233 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.6□□□□□ -2.15
CD74P04233 AC138627.2-201ENST00000624202 601 ntBASIC1.6□□□□□ -2.15
CD74P04233 FARSBP1-201ENST00000435808 1778 ntBASIC1.59□□□□□ -2.15
CD74P04233 RBBP8P1-201ENST00000449447 1844 ntBASIC1.59□□□□□ -2.15
CD74P04233 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CD74P04233 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.59□□□□□ -2.15
CD74P04233 AC138393.1-203ENST00000327086 343 ntBASIC1.59□□□□□ -2.15
CD74P04233 SNORA62.1-201ENST00000364287 154 ntBASIC1.59□□□□□ -2.15
CD74P04233 SNORD14B-201ENST00000364533 90 ntBASIC1.59□□□□□ -2.15
CD74P04233 MIR95-201ENST00000385072 81 ntBASIC1.59□□□□□ -2.15
CD74P04233 EEF1A1P40-201ENST00000412883 573 ntBASIC1.59□□□□□ -2.15
CD74P04233 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.59□□□□□ -2.15
CD74P04233 AC092447.3-201ENST00000426027 686 ntBASIC1.59□□□□□ -2.15
CD74P04233 TOMM20P4-201ENST00000427861 435 ntBASIC1.59□□□□□ -2.15
CD74P04233 AL627311.1-201ENST00000431514 115 ntBASIC1.59□□□□□ -2.15
CD74P04233 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.59□□□□□ -2.15
CD74P04233 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.59□□□□□ -2.15
CD74P04233 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.59□□□□□ -2.15
CD74P04233 AL161788.1-201ENST00000441805 169 ntBASIC1.59□□□□□ -2.15
CD74P04233 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.59□□□□□ -2.15
CD74P04233 FDX1P2-201ENST00000450769 375 ntBASIC1.59□□□□□ -2.15
CD74P04233 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.59□□□□□ -2.15
CD74P04233 MED28P2-201ENST00000475771 317 ntBASIC1.59□□□□□ -2.15
CD74P04233 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.59□□□□□ -2.15
CD74P04233 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.59□□□□□ -2.15
CD74P04233 AC098862.1-201ENST00000504991 413 ntBASIC1.59□□□□□ -2.15
CD74P04233 AC092436.1-201ENST00000506450 503 ntBASIC1.59□□□□□ -2.15
CD74P04233 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CD74P04233 SNORA31.23-201ENST00000517219 133 ntBASIC1.59□□□□□ -2.15
CD74P04233 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.59□□□□□ -2.15
CD74P04233 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.59□□□□□ -2.15
CD74P04233 AC024614.2-201ENST00000577584 372 ntBASIC1.59□□□□□ -2.15
CD74P04233 AC026271.5-201ENST00000577873 130 ntBASIC1.59□□□□□ -2.15
CD74P04233 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms