Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 CBX3P1-201ENST00000325243 554 ntBASIC2.58□□□□□ -2
RAF1P04049 RPL9P7-201ENST00000330965 580 ntBASIC2.58□□□□□ -2
RAF1P04049 AC062016.1-201ENST00000355719 319 ntBASIC2.58□□□□□ -2
RAF1P04049 RNU4-82P-201ENST00000362443 140 ntBASIC2.58□□□□□ -2
RAF1P04049 Y_RNA.70-201ENST00000362886 110 ntBASIC2.58□□□□□ -2
RAF1P04049 SNORA32.2-201ENST00000384049 122 ntBASIC2.58□□□□□ -2
RAF1P04049 RNU6-767P-201ENST00000384132 107 ntBASIC2.58□□□□□ -2
RAF1P04049 RNU6-1179P-201ENST00000384667 107 ntBASIC2.58□□□□□ -2
RAF1P04049 HMGN2P35-201ENST00000412164 270 ntBASIC2.58□□□□□ -2
RAF1P04049 AL096701.2-201ENST00000416920 238 ntBASIC2.58□□□□□ -2
RAF1P04049 AC009161.1-201ENST00000417306 376 ntBASIC2.58□□□□□ -2
RAF1P04049 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.58□□□□□ -2
RAF1P04049 AC098614.2-201ENST00000426040 255 ntBASIC2.58□□□□□ -2
RAF1P04049 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.58□□□□□ -2
RAF1P04049 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.58□□□□□ -2
RAF1P04049 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.58□□□□□ -2
RAF1P04049 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.58□□□□□ -2
RAF1P04049 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.58□□□□□ -2
RAF1P04049 RNU7-66P-201ENST00000459469 62 ntBASIC2.58□□□□□ -2
RAF1P04049 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.58□□□□□ -2
RAF1P04049 AC008716.1-201ENST00000511084 513 ntBASIC2.58□□□□□ -2
RAF1P04049 TBCAP3-201ENST00000512475 312 ntBASIC2.58□□□□□ -2
RAF1P04049 RNU1-86P-201ENST00000516108 154 ntBASIC2.58□□□□□ -2
RAF1P04049 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.58□□□□□ -2
RAF1P04049 RNU6-875P-201ENST00000516488 106 ntBASIC2.58□□□□□ -2
RAF1P04049 RNU1-107P-201ENST00000516617 154 ntBASIC2.58□□□□□ -2
RAF1P04049 RNU6-1183P-201ENST00000517054 60 ntBASIC2.58□□□□□ -2
RAF1P04049 SNORA31.19-201ENST00000517079 126 ntBASIC2.58□□□□□ -2
RAF1P04049 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.58□□□□□ -2
RAF1P04049 MIR4782-201ENST00000577987 79 ntBASIC2.58□□□□□ -2
RAF1P04049 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.58□□□□□ -2
RAF1P04049 AC138761.3-201ENST00000579993 334 ntBASIC2.58□□□□□ -2
RAF1P04049 UBE2V2P2-201ENST00000587677 504 ntBASIC2.58□□□□□ -2
RAF1P04049 AC009994.1-201ENST00000606889 253 ntBASIC2.58□□□□□ -2
RAF1P04049 AC104260.1-201ENST00000616660 539 ntBASIC2.58□□□□□ -2
RAF1P04049 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.58□□□□□ -2
RAF1P04049 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.57□□□□□ -2
RAF1P04049 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RAF1P04049 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.57□□□□□ -2
RAF1P04049 RNU6-845P-201ENST00000362578 103 ntBASIC2.57□□□□□ -2
RAF1P04049 VTRNA1-1-201ENST00000363120 99 ntBASIC2.57□□□□□ -2
RAF1P04049 Y_RNA.100-201ENST00000363141 102 ntBASIC2.57□□□□□ -2
RAF1P04049 RNU6-831P-201ENST00000384548 107 ntBASIC2.57□□□□□ -2
RAF1P04049 RNU6-750P-201ENST00000390946 107 ntBASIC2.57□□□□□ -2
RAF1P04049 AL356057.2-201ENST00000403318 432 ntBASIC2.57□□□□□ -2
RAF1P04049 RNU2-3P-201ENST00000410144 191 ntBASIC2.57□□□□□ -2
RAF1P04049 RNU6-607P-201ENST00000411283 108 ntBASIC2.57□□□□□ -2
RAF1P04049 RNA5SP508-201ENST00000411327 119 ntBASIC2.57□□□□□ -2
RAF1P04049 AL592148.1-201ENST00000413568 445 ntBASIC2.57□□□□□ -2
RAF1P04049 CYCSP33-201ENST00000414485 327 ntBASIC2.57□□□□□ -2
RAF1P04049 RPLP0P7-201ENST00000416050 667 ntBASIC2.57□□□□□ -2
RAF1P04049 AL353621.1-201ENST00000418219 243 ntBASIC2.57□□□□□ -2
RAF1P04049 MTCO3P46-201ENST00000425787 232 ntBASIC2.57□□□□□ -2
RAF1P04049 AC063976.3-201ENST00000426849 329 ntBASIC2.57□□□□□ -2
RAF1P04049 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.57□□□□□ -2
RAF1P04049 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.57□□□□□ -2
RAF1P04049 BRK1P2-201ENST00000442875 223 ntBASIC2.57□□□□□ -2
RAF1P04049 EEF1B2P7-201ENST00000451177 676 ntBASIC2.57□□□□□ -2
RAF1P04049 AC233279.1-201ENST00000455300 423 ntBASIC2.57□□□□□ -2
RAF1P04049 AC087884.1-201ENST00000469738 328 ntBASIC2.57□□□□□ -2
RAF1P04049 AC090525.1-201ENST00000479116 478 ntBASIC2.57□□□□□ -2
RAF1P04049 HIGD1AP13-201ENST00000509878 289 ntBASIC2.57□□□□□ -2
RAF1P04049 RNU4-49P-201ENST00000516080 140 ntBASIC2.57□□□□□ -2
RAF1P04049 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.57□□□□□ -2
RAF1P04049 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.57□□□□□ -2
RAF1P04049 AC021739.1-201ENST00000559631 174 ntBASIC2.57□□□□□ -2
RAF1P04049 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.57□□□□□ -2
RAF1P04049 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.57□□□□□ -2
RAF1P04049 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RAF1P04049 MTND4P12-201ENST00000498999 1377 ntBASIC2.57□□□□□ -2
RAF1P04049 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RAF1P04049 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.57□□□□□ -2
RAF1P04049 ZNF519P1-201ENST00000449011 1626 ntBASIC2.57□□□□□ -2
RAF1P04049 AC010889.1-201ENST00000566193 2666 ntBASIC2.56□□□□□ -2
RAF1P04049 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RAF1P04049 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
RAF1P04049 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.56□□□□□ -2
RAF1P04049 SNORA25.6-201ENST00000364121 118 ntBASIC2.56□□□□□ -2
RAF1P04049 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.56□□□□□ -2
RAF1P04049 Y_RNA.530-201ENST00000384587 101 ntBASIC2.56□□□□□ -2
RAF1P04049 SNORA40C-201ENST00000391285 128 ntBASIC2.56□□□□□ -2
RAF1P04049 AL513477.1-202ENST00000417061 214 ntBASIC2.56□□□□□ -2
RAF1P04049 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.56□□□□□ -2
RAF1P04049 USP9YP20-201ENST00000419224 558 ntBASIC2.56□□□□□ -2
RAF1P04049 PDCL2P1-201ENST00000419302 352 ntBASIC2.56□□□□□ -2
RAF1P04049 IFNA20P-201ENST00000436840 528 ntBASIC2.56□□□□□ -2
RAF1P04049 RPL7P12-201ENST00000446719 750 ntBASIC2.56□□□□□ -2
RAF1P04049 HMGN2P10-201ENST00000448085 265 ntBASIC2.56□□□□□ -2
RAF1P04049 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.56□□□□□ -2
RAF1P04049 AC113155.1-201ENST00000511141 769 ntBASIC2.56□□□□□ -2
RAF1P04049 SNORA14.1-201ENST00000516113 141 ntBASIC2.56□□□□□ -2
RAF1P04049 SNORA9.3-201ENST00000516383 129 ntBASIC2.56□□□□□ -2
RAF1P04049 SNORA25.17-201ENST00000517184 124 ntBASIC2.56□□□□□ -2
RAF1P04049 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.56□□□□□ -2
RAF1P04049 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.56□□□□□ -2
RAF1P04049 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.56□□□□□ -2
RAF1P04049 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.56□□□□□ -2
RAF1P04049 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.56□□□□□ -2
RAF1P04049 AL121821.2-201ENST00000556081 394 ntBASIC2.56□□□□□ -2
RAF1P04049 LRRC37A5P-203ENST00000580181 585 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms