Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.64□□□□□ -1.99
COL2A1P02458 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.64□□□□□ -1.99
COL2A1P02458 RNU6-120P-201ENST00000516077 103 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 RNU6-566P-201ENST00000516790 107 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.64□□□□□ -1.99
COL2A1P02458 AC068587.5-201ENST00000528506 175 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.64□□□□□ -1.99
COL2A1P02458 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL2A1P02458 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL2A1P02458 AL163153.1-201ENST00000554223 283 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 AC007151.1-201ENST00000572774 483 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 MIR4790-201ENST00000577799 79 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.64□□□□□ -1.99
COL2A1P02458 MIR3668-201ENST00000582138 75 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 MIR3672-201ENST00000584290 82 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 AF038458.1-201ENST00000588406 262 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 AC060766.3-201ENST00000591442 263 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 DPPA3P3-201ENST00000603842 430 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 AP000654.2-201ENST00000605633 586 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 AC092807.2-201ENST00000609367 243 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 AL590099.1-201ENST00000615276 138 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 MIR8070-201ENST00000616510 88 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.64□□□□□ -1.99
COL2A1P02458 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.64□□□□□ -1.99
COL2A1P02458 AC130650.2-201ENST00000618736 2403 ntBASIC2.64□□□□□ -1.99
COL2A1P02458 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL2A1P02458 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.63□□□□□ -1.99
COL2A1P02458 AL161431.1-201ENST00000618966 4205 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL2A1P02458 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.63□□□□□ -1.99
COL2A1P02458 RNU6-238P-201ENST00000363313 106 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 SNORA25.6-201ENST00000364121 118 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 RNU6-1318P-201ENST00000365389 103 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL2A1P02458 Y_RNA.414-201ENST00000384011 101 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 Y_RNA.527-201ENST00000384573 102 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 MIR19A-201ENST00000384878 82 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 MIR514A2-201ENST00000385131 88 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 MIR514A3-201ENST00000385132 88 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 MIR221-201ENST00000385135 110 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 MIR454-201ENST00000390180 115 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 RNU6-278P-201ENST00000390945 109 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 NDUFS5P1-201ENST00000405668 289 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 RNU2-36P-201ENST00000410361 191 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 RPS12P24-201ENST00000412619 387 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 RPL37P10-201ENST00000412884 288 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 NCOR1P3-201ENST00000420479 303 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL2A1P02458 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.63□□□□□ -1.99
COL2A1P02458 UBE2V1P13-201ENST00000436983 439 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 AC107399.1-201ENST00000451226 265 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 MTND1P9-201ENST00000453775 944 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 TRBV26-201ENST00000456572 344 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 RNU6-1218P-201ENST00000458990 108 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.63□□□□□ -1.99
COL2A1P02458 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 RNU6-864P-201ENST00000516256 108 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.63□□□□□ -1.99
COL2A1P02458 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.63□□□□□ -1.99
COL2A1P02458 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.63□□□□□ -1.99
COL2A1P02458 VN1R107P-201ENST00000601784 209 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 AC007485.1-201ENST00000616755 206 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 AC011155.2-201ENST00000623202 216 ntBASIC2.63□□□□□ -1.99
COL2A1P02458 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL2A1P02458 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL2A1P02458 AL049641.1-201ENST00000441055 1948 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
COL2A1P02458 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.62□□□□□ -1.99
COL2A1P02458 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL2A1P02458 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
COL2A1P02458 HSPE1P11-201ENST00000339579 310 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 Y_RNA.28-201ENST00000362554 111 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 Y_RNA.187-201ENST00000363918 113 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 SNORD6-201ENST00000365444 73 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
COL2A1P02458 MIR558-201ENST00000384920 94 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 U3.20-201ENST00000390909 217 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 RNA5SP213-201ENST00000391031 106 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 MIR548K-201ENST00000408406 116 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 RNU2-15P-201ENST00000410692 191 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 RNU6-193P-201ENST00000410977 107 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.62□□□□□ -1.99
COL2A1P02458 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.62□□□□□ -1.99
COL2A1P02458 RAC1P6-201ENST00000423911 575 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.62□□□□□ -1.99
COL2A1P02458 Z98742.2-201ENST00000431564 187 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.62□□□□□ -1.99
COL2A1P02458 AC104308.1-201ENST00000454621 333 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 RNU7-182P-201ENST00000459009 62 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 AC104472.2-201ENST00000469035 601 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.62□□□□□ -1.99
COL2A1P02458 AC021382.1-201ENST00000483523 359 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 SMURF2P1-201ENST00000514992 481 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 Y_RNA.661-201ENST00000516003 99 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.62□□□□□ -1.99
COL2A1P02458 MTND4P7-201ENST00000523876 130 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.62□□□□□ -1.99
COL2A1P02458 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.62□□□□□ -1.99
COL2A1P02458 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.62□□□□□ -1.99
COL2A1P02458 MIR3149-201ENST00000584629 83 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms