Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RMST_4.1-201ENST00000616886 107 ntBASIC0.73□□□□□ -2.29
IFNA1P01562 AL353770.2-201ENST00000620024 78 ntBASIC0.73□□□□□ -2.29
IFNA1P01562 AL691447.3-201ENST00000635020 330 ntBASIC0.73□□□□□ -2.29
IFNA1P01562 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
IFNA1P01562 AC245060.5-201ENST00000610778 3293 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 RNU1-36P-201ENST00000365130 165 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 RNU6-468P-201ENST00000384003 109 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 RNU6-701P-201ENST00000384059 107 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 MIR520A-201ENST00000384862 85 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 AL357139.1-201ENST00000407792 426 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 MIR1289-2-201ENST00000408360 111 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 USP9YP33-201ENST00000412220 421 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 AC009518.2-201ENST00000418056 731 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.72□□□□□ -2.29
IFNA1P01562 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.72□□□□□ -2.29
IFNA1P01562 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.72□□□□□ -2.29
IFNA1P01562 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.72□□□□□ -2.29
IFNA1P01562 AC087343.1-201ENST00000477341 475 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 RNU6-1315P-201ENST00000517187 99 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.72□□□□□ -2.29
IFNA1P01562 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.72□□□□□ -2.29
IFNA1P01562 CR383656.8-201ENST00000549046 145 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 RPS3AP4-201ENST00000555161 764 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 VN1R87P-201ENST00000596706 487 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 BNIP3P31-201ENST00000604515 566 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 AC211469.2-201ENST00000605461 205 ntBASIC0.72□□□□□ -2.29
IFNA1P01562 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.72□□□□□ -2.29
IFNA1P01562 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
IFNA1P01562 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.72□□□□□ -2.29
IFNA1P01562 RNU6-942P-201ENST00000363002 107 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 RNU4-51P-201ENST00000364206 140 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 Y_RNA.408-201ENST00000383987 102 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 MIR548B-201ENST00000385247 97 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 RPS15AP12-201ENST00000419498 388 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 SNX2P2-201ENST00000424553 323 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.71□□□□□ -2.3
IFNA1P01562 AL591704.1-201ENST00000432574 275 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 AC245047.4-201ENST00000433189 144 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 SNRPEP7-201ENST00000438350 220 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 MTCO3P43-201ENST00000440974 771 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.71□□□□□ -2.3
IFNA1P01562 RPL31P3-201ENST00000458430 332 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 RNU6-953P-201ENST00000459154 107 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 MTND1P16-201ENST00000465177 898 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 AC134050.1-201ENST00000495088 933 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.71□□□□□ -2.3
IFNA1P01562 ACA64.5-201ENST00000516207 127 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 RN7SKP88-201ENST00000516847 250 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.71□□□□□ -2.3
IFNA1P01562 CYCSP23-201ENST00000519781 313 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.71□□□□□ -2.3
IFNA1P01562 AC092325.1-201ENST00000566449 554 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 MIR3912-201ENST00000577566 105 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 AC025811.1-201ENST00000604312 472 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 7SK.8-201ENST00000612110 250 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 7SK.11-201ENST00000615477 250 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 AL157834.3-201ENST00000615543 103 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 7SK.13-201ENST00000622040 250 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 AL136313.1-201ENST00000624804 202 ntBASIC0.71□□□□□ -2.3
IFNA1P01562 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.7□□□□□ -2.3
IFNA1P01562 RN7SKP61-201ENST00000410642 295 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 RNU2-7P-201ENST00000410794 178 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 SNRPEP10-201ENST00000420249 274 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 PIGFP2-201ENST00000421400 651 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 HMGN2P18-201ENST00000450680 270 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.7□□□□□ -2.3
IFNA1P01562 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
IFNA1P01562 AC009646.1-201ENST00000510455 318 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 RNA5SP437-201ENST00000517249 129 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 AC104417.1-201ENST00000523974 751 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 AL157871.3-201ENST00000557231 293 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.7□□□□□ -2.3
IFNA1P01562 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.7□□□□□ -2.3
IFNA1P01562 AC007363.1-201ENST00000604736 620 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 AC090578.1-201ENST00000604955 591 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 RPL21P136-201ENST00000605378 396 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 MIR6078-201ENST00000611069 100 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 OR4G3P-201ENST00000633500 913 ntBASIC0.7□□□□□ -2.3
IFNA1P01562 RNU6-457P-201ENST00000363999 107 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 U8.10-201ENST00000384260 133 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 Y_RNA.534-201ENST00000384599 112 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 MIR146A-201ENST00000385201 99 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 RNA5SP390-201ENST00000410191 113 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 TIMM9P2-201ENST00000419324 266 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 AC083875.1-201ENST00000419509 405 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.69□□□□□ -2.3
IFNA1P01562 RPS4XP11-201ENST00000446897 772 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.69□□□□□ -2.3
IFNA1P01562 RNU5A-4P-201ENST00000516588 111 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 RNA5SP490-201ENST00000517141 136 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.69□□□□□ -2.3
IFNA1P01562 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.69□□□□□ -2.3
IFNA1P01562 AC078880.5-201ENST00000617845 421 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.69□□□□□ -2.3
IFNA1P01562 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.69□□□□□ -2.3
IFNA1P01562 MTND5P33-201ENST00000571250 1450 ntBASIC0.68□□□□□ -2.3
IFNA1P01562 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
IFNA1P01562 Y_RNA.33-201ENST00000362591 102 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms