Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.17□□□□□ -1.74
VAMP4O75379 CECR9-201ENST00000453421 199 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 AC013470.1-201ENST00000453438 462 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.17□□□□□ -1.74
VAMP4O75379 HMGN2P16-201ENST00000456802 261 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 BX510359.1-201ENST00000456973 237 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 snoU13.22-201ENST00000459428 104 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.17□□□□□ -1.74
VAMP4O75379 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
VAMP4O75379 PHBP14-201ENST00000512887 367 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 RNU7-4P-201ENST00000516961 62 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 SCARNA20.6-201ENST00000517251 106 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.17□□□□□ -1.74
VAMP4O75379 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.17□□□□□ -1.74
VAMP4O75379 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.17□□□□□ -1.74
VAMP4O75379 TRAV28-201ENST00000557548 323 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 MIR5696-201ENST00000578474 85 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.17□□□□□ -1.74
VAMP4O75379 AC124312.5-201ENST00000604451 268 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.17□□□□□ -1.74
VAMP4O75379 AP001486.2-201ENST00000561652 5113 ntBASIC4.17□□□□□ -1.74
VAMP4O75379 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VAMP4O75379 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VAMP4O75379 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VAMP4O75379 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VAMP4O75379 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VAMP4O75379 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.16□□□□□ -1.74
VAMP4O75379 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
VAMP4O75379 MTND5P27-201ENST00000428871 1720 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.16□□□□□ -1.74
VAMP4O75379 RNU6-1318P-201ENST00000365389 103 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.16□□□□□ -1.74
VAMP4O75379 RNA5SP129-201ENST00000410276 118 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 AC009237.8-201ENST00000445492 379 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 AL583843.1-201ENST00000456070 346 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 RPL23AP45-201ENST00000476406 468 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 MYL12BP1-201ENST00000569826 507 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 MIR5680-201ENST00000577577 84 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 AC100812.1-201ENST00000607622 580 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 AC096577.2-201ENST00000611455 153 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 AC004852.3-201ENST00000614131 326 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VAMP4O75379 U7.8-201ENST00000619968 63 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 AC007496.3-201ENST00000624987 3443 ntBASIC4.16□□□□□ -1.74
VAMP4O75379 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.16□□□□□ -1.74
VAMP4O75379 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VAMP4O75379 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VAMP4O75379 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.16□□□□□ -1.74
VAMP4O75379 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
VAMP4O75379 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.15□□□□□ -1.75
VAMP4O75379 Y_RNA.48-201ENST00000362710 103 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 Y_RNA.106-201ENST00000363189 100 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 RNU6-238P-201ENST00000363313 106 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 RNU6-450P-201ENST00000364654 107 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 RNU4-42P-201ENST00000364738 142 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 RNU6-166P-201ENST00000384371 107 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.15□□□□□ -1.75
VAMP4O75379 AL117339.3-201ENST00000418733 162 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 PGBD4P6-201ENST00000421501 610 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 TOMM20P4-201ENST00000427861 435 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 AC007919.1-201ENST00000429380 217 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 ARF4P2-201ENST00000430209 526 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 AL353997.1-201ENST00000432936 108 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 AC092573.2-201ENST00000434546 243 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 AC073910.1-201ENST00000445047 438 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 CHEK2P4-201ENST00000450340 246 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 U8.21-201ENST00000459536 136 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 RN7SL807P-201ENST00000470923 297 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 KC877373.1-201ENST00000479066 408 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 FO393415.2-201ENST00000480085 343 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 AC114801.2-201ENST00000503825 781 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 Y_RNA.687-201ENST00000516558 91 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.15□□□□□ -1.75
VAMP4O75379 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.15□□□□□ -1.75
VAMP4O75379 MIR5047-201ENST00000579212 100 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 MIR5188-201ENST00000583467 113 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 AL355598.1-201ENST00000604169 202 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 MIR8076-201ENST00000611401 83 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 AC138627.2-201ENST00000624202 601 ntBASIC4.15□□□□□ -1.75
VAMP4O75379 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.15□□□□□ -1.75
VAMP4O75379 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
VAMP4O75379 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VAMP4O75379 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
VAMP4O75379 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.14□□□□□ -1.75
VAMP4O75379 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VAMP4O75379 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VAMP4O75379 RNU6-827P-201ENST00000365553 106 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VAMP4O75379 MIR10A-201ENST00000385043 110 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 MIR34A-201ENST00000385130 110 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.14□□□□□ -1.75
VAMP4O75379 CST9LP2-201ENST00000437612 320 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 PIGFP3-201ENST00000441918 722 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.14□□□□□ -1.75
VAMP4O75379 HMGN2P13-201ENST00000476476 274 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 RN7SL283P-201ENST00000489055 303 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.14□□□□□ -1.75
VAMP4O75379 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.14□□□□□ -1.75
VAMP4O75379 RNA5SP165-201ENST00000517142 115 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 AC144568.1-201ENST00000520139 137 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms