Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.36□□□□□ -1.87
PROM1O43490 TRAV28-201ENST00000557548 323 ntBASIC3.36□□□□□ -1.87
PROM1O43490 TGIF1P1-201ENST00000558095 802 ntBASIC3.36□□□□□ -1.87
PROM1O43490 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.36□□□□□ -1.87
PROM1O43490 MIR4503-201ENST00000582187 83 ntBASIC3.36□□□□□ -1.87
PROM1O43490 MIR3922-201ENST00000585192 84 ntBASIC3.36□□□□□ -1.87
PROM1O43490 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.36□□□□□ -1.87
PROM1O43490 AC008121.1-201ENST00000603244 268 ntBASIC3.36□□□□□ -1.87
PROM1O43490 AC004805.2-201ENST00000605382 482 ntBASIC3.36□□□□□ -1.87
PROM1O43490 MIR7851-201ENST00000610611 160 ntBASIC3.36□□□□□ -1.87
PROM1O43490 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.36□□□□□ -1.87
PROM1O43490 SNORA50A-202ENST00000629536 136 ntBASIC3.36□□□□□ -1.87
PROM1O43490 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PROM1O43490 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PROM1O43490 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.36□□□□□ -1.87
PROM1O43490 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.36□□□□□ -1.87
PROM1O43490 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PROM1O43490 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.36□□□□□ -1.87
PROM1O43490 AC068647.1-201ENST00000489539 2265 ntBASIC3.36□□□□□ -1.87
PROM1O43490 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.36□□□□□ -1.87
PROM1O43490 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
PROM1O43490 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PROM1O43490 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PROM1O43490 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PROM1O43490 AC007785.2-201ENST00000598627 1916 ntBASIC3.35□□□□□ -1.87
PROM1O43490 RPL9P7-201ENST00000330965 580 ntBASIC3.35□□□□□ -1.87
PROM1O43490 Y_RNA.39-201ENST00000362620 98 ntBASIC3.35□□□□□ -1.87
PROM1O43490 RNU6-450P-201ENST00000364654 107 ntBASIC3.35□□□□□ -1.87
PROM1O43490 RNU6-99P-201ENST00000364721 107 ntBASIC3.35□□□□□ -1.87
PROM1O43490 MIR521-1-201ENST00000384902 87 ntBASIC3.35□□□□□ -1.87
PROM1O43490 MIR218-2-201ENST00000385006 110 ntBASIC3.35□□□□□ -1.87
PROM1O43490 MIR568-201ENST00000385036 95 ntBASIC3.35□□□□□ -1.87
PROM1O43490 MIR34A-201ENST00000385130 110 ntBASIC3.35□□□□□ -1.87
PROM1O43490 MIR1302-3-201ENST00000408128 138 ntBASIC3.35□□□□□ -1.87
PROM1O43490 MIR548F4-201ENST00000408515 105 ntBASIC3.35□□□□□ -1.87
PROM1O43490 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PROM1O43490 DPH3P2-201ENST00000422618 250 ntBASIC3.35□□□□□ -1.87
PROM1O43490 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PROM1O43490 MTCYBP9-201ENST00000431021 303 ntBASIC3.35□□□□□ -1.87
PROM1O43490 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.35□□□□□ -1.87
PROM1O43490 AL513043.1-201ENST00000439124 535 ntBASIC3.35□□□□□ -1.87
PROM1O43490 CYCSP32-201ENST00000440548 321 ntBASIC3.35□□□□□ -1.87
PROM1O43490 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.35□□□□□ -1.87
PROM1O43490 RPL9P9-202ENST00000466501 579 ntBASIC3.35□□□□□ -1.87
PROM1O43490 RN7SL594P-201ENST00000470590 287 ntBASIC3.35□□□□□ -1.87
PROM1O43490 RPL17P19-201ENST00000489069 552 ntBASIC3.35□□□□□ -1.87
PROM1O43490 AC116655.1-201ENST00000508324 901 ntBASIC3.35□□□□□ -1.87
PROM1O43490 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.35□□□□□ -1.87
PROM1O43490 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.35□□□□□ -1.87
PROM1O43490 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.35□□□□□ -1.87
PROM1O43490 SNORA70.18-201ENST00000516696 98 ntBASIC3.35□□□□□ -1.87
PROM1O43490 AC093331.1-201ENST00000521474 169 ntBASIC3.35□□□□□ -1.87
PROM1O43490 CBX3P8-201ENST00000532412 525 ntBASIC3.35□□□□□ -1.87
PROM1O43490 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.35□□□□□ -1.87
PROM1O43490 MIR3149-201ENST00000584629 83 ntBASIC3.35□□□□□ -1.87
PROM1O43490 AC009314.1-201ENST00000603871 304 ntBASIC3.35□□□□□ -1.87
PROM1O43490 AC018889.1-201ENST00000605372 397 ntBASIC3.35□□□□□ -1.87
PROM1O43490 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.35□□□□□ -1.87
PROM1O43490 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PROM1O43490 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.35□□□□□ -1.87
PROM1O43490 AC091812.1-201ENST00000432235 1948 ntBASIC3.34□□□□□ -1.87
PROM1O43490 AC233263.6-201ENST00000631132 1963 ntBASIC3.34□□□□□ -1.87
PROM1O43490 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.34□□□□□ -1.87
PROM1O43490 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PROM1O43490 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PROM1O43490 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PROM1O43490 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PROM1O43490 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PROM1O43490 SAR1AP2-201ENST00000392696 594 ntBASIC3.34□□□□□ -1.87
PROM1O43490 RNU6-101P-201ENST00000410323 104 ntBASIC3.34□□□□□ -1.87
PROM1O43490 RNU6-174P-201ENST00000410406 106 ntBASIC3.34□□□□□ -1.87
PROM1O43490 RNU2-23P-201ENST00000410545 195 ntBASIC3.34□□□□□ -1.87
PROM1O43490 HMGB3P2-201ENST00000411913 584 ntBASIC3.34□□□□□ -1.87
PROM1O43490 SNORD56-201ENST00000413522 71 ntBASIC3.34□□□□□ -1.87
PROM1O43490 DBIP2-201ENST00000419076 262 ntBASIC3.34□□□□□ -1.87
PROM1O43490 CYCSP4-201ENST00000429682 331 ntBASIC3.34□□□□□ -1.87
PROM1O43490 AL159987.2-201ENST00000432754 307 ntBASIC3.34□□□□□ -1.87
PROM1O43490 NDUFB1P2-201ENST00000449477 176 ntBASIC3.34□□□□□ -1.87
PROM1O43490 CYCSP35-201ENST00000451978 304 ntBASIC3.34□□□□□ -1.87
PROM1O43490 AC010401.1-201ENST00000463867 348 ntBASIC3.34□□□□□ -1.87
PROM1O43490 AC133134.1-201ENST00000466800 359 ntBASIC3.34□□□□□ -1.87
PROM1O43490 RPS4XP22-201ENST00000480755 780 ntBASIC3.34□□□□□ -1.87
PROM1O43490 AC022447.4-201ENST00000504053 364 ntBASIC3.34□□□□□ -1.87
PROM1O43490 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
PROM1O43490 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.34□□□□□ -1.87
PROM1O43490 MTCO2P24-201ENST00000515611 426 ntBASIC3.34□□□□□ -1.87
PROM1O43490 AC026333.2-201ENST00000542164 106 ntBASIC3.34□□□□□ -1.87
PROM1O43490 AC011602.1-201ENST00000546484 331 ntBASIC3.34□□□□□ -1.87
PROM1O43490 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.34□□□□□ -1.87
PROM1O43490 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.34□□□□□ -1.87
PROM1O43490 AC006006.1-201ENST00000603082 144 ntBASIC3.34□□□□□ -1.87
PROM1O43490 AL645944.1-201ENST00000603857 493 ntBASIC3.34□□□□□ -1.87
PROM1O43490 AC104695.3-201ENST00000604052 296 ntBASIC3.34□□□□□ -1.87
PROM1O43490 AC005000.2-201ENST00000605468 310 ntBASIC3.34□□□□□ -1.87
PROM1O43490 Z69720.2-201ENST00000624755 279 ntBASIC3.34□□□□□ -1.87
PROM1O43490 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.34□□□□□ -1.87
PROM1O43490 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PROM1O43490 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.34□□□□□ -1.87
PROM1O43490 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.34□□□□□ -1.87
PROM1O43490 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms