Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.1□□□□□ -1.91
NPHP1O15259 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NPHP1O15259 AC024909.2-201ENST00000553035 286 ntBASIC3.1□□□□□ -1.91
NPHP1O15259 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.1□□□□□ -1.91
NPHP1O15259 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.1□□□□□ -1.91
NPHP1O15259 AGGF1P4-201ENST00000568249 801 ntBASIC3.1□□□□□ -1.91
NPHP1O15259 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.1□□□□□ -1.91
NPHP1O15259 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NPHP1O15259 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.09□□□□□ -1.91
NPHP1O15259 RNU6-517P-201ENST00000384362 110 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 RNU6-393P-201ENST00000384475 107 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 SNORD70.1-201ENST00000391007 85 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 RNU6-1140P-201ENST00000410517 106 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 RNU4-55P-201ENST00000410731 137 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 AC012308.1-201ENST00000451232 178 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 CACYBPP2-201ENST00000453625 678 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 TBCAP3-201ENST00000512475 312 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 RNA5SP281-201ENST00000516504 135 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 SNORA31.23-201ENST00000517219 133 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.09□□□□□ -1.91
NPHP1O15259 MIR5194-201ENST00000582634 120 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.09□□□□□ -1.91
NPHP1O15259 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.09□□□□□ -1.91
NPHP1O15259 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 AC022418.1-201ENST00000624118 445 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 Z69720.2-201ENST00000624755 279 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.09□□□□□ -1.91
NPHP1O15259 MTND5P26-201ENST00000426018 1752 ntBASIC3.09□□□□□ -1.91
NPHP1O15259 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NPHP1O15259 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.09□□□□□ -1.92
NPHP1O15259 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.08□□□□□ -1.92
NPHP1O15259 SNORD114-19-201ENST00000363072 75 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 RNA5SP393-201ENST00000363423 117 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 Y_RNA.324-201ENST00000365165 102 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 RNU6-996P-201ENST00000365438 107 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 SNORA16.2-201ENST00000390991 127 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 UBE2V1P10-201ENST00000414685 269 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 CYCSP48-201ENST00000417124 323 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.08□□□□□ -1.92
NPHP1O15259 MTCYBP8-201ENST00000422855 651 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 EIF4EP4-201ENST00000424916 578 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 AC010975.2-201ENST00000427781 588 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 AL365400.1-201ENST00000431854 640 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 MRPL50P4-201ENST00000446432 475 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.08□□□□□ -1.92
NPHP1O15259 SCARNA18-201ENST00000459004 134 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.08□□□□□ -1.92
NPHP1O15259 RNU2-69P-201ENST00000516061 100 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 AP003392.2-201ENST00000527269 208 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 AC093788.1-201ENST00000609356 927 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 AC009233.1-201ENST00000616477 371 ntBASIC3.08□□□□□ -1.92
NPHP1O15259 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.08□□□□□ -1.92
NPHP1O15259 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
NPHP1O15259 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
NPHP1O15259 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NPHP1O15259 RNU6-1010P-201ENST00000362757 107 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 RNU6-78P-201ENST00000362897 107 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 RNU6-434P-201ENST00000384376 107 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 RNU6-1158P-201ENST00000391167 107 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 RNU2-16P-201ENST00000410712 136 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 AL096701.2-201ENST00000416920 238 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 AC074117.2-201ENST00000417130 397 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.07□□□□□ -1.92
NPHP1O15259 SNRPFP3-201ENST00000457792 225 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 AC108210.2-201ENST00000503681 201 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 MTND2P33-201ENST00000506452 1031 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 MTCYBP40-201ENST00000509390 1135 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 MTCO3P7-201ENST00000510008 774 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.07□□□□□ -1.92
NPHP1O15259 HIF1AP1-201ENST00000553642 175 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 MTCO3P23-201ENST00000561363 289 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 AC012507.3-201ENST00000603556 477 ntBASIC3.07□□□□□ -1.92
NPHP1O15259 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NPHP1O15259 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NPHP1O15259 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
NPHP1O15259 RNU6-259P-201ENST00000383999 107 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 HMGN2P35-201ENST00000412164 270 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 OR9R1P-201ENST00000412200 877 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.06□□□□□ -1.92
NPHP1O15259 PRPS1P1-201ENST00000445305 876 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 AC073415.1-201ENST00000449240 153 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.06□□□□□ -1.92
NPHP1O15259 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.06□□□□□ -1.92
NPHP1O15259 AP000705.1-201ENST00000454567 350 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 AC105313.1-201ENST00000509121 353 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.06□□□□□ -1.92
NPHP1O15259 MTND3P5-201ENST00000512798 333 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 RNU6-826P-201ENST00000516827 104 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 AL137161.1-201ENST00000532231 390 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.06□□□□□ -1.92
NPHP1O15259 DEFB122-202ENST00000569013 197 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 AL356575.1-201ENST00000603008 283 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 AC097065.2-201ENST00000608159 533 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 AC046143.2-201ENST00000609789 160 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 AC017083.3-201ENST00000609955 700 ntBASIC3.06□□□□□ -1.92
NPHP1O15259 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.05□□□□□ -1.92
NPHP1O15259 AL354685.2-201ENST00000448218 1447 ntBASIC3.05□□□□□ -1.92
NPHP1O15259 RNU4-24P-201ENST00000364565 139 ntBASIC3.05□□□□□ -1.92
NPHP1O15259 RNU5E-7P-201ENST00000365290 117 ntBASIC3.05□□□□□ -1.92
NPHP1O15259 Y_RNA.381-201ENST00000365666 102 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms