Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.38□□□□□ -2.35
CHD1O14646 RNU6-91P-201ENST00000607774 107 ntBASIC0.38□□□□□ -2.35
CHD1O14646 AC013476.2-201ENST00000614456 459 ntBASIC0.38□□□□□ -2.35
CHD1O14646 AL109620.1-201ENST00000618738 1197 ntBASIC0.38□□□□□ -2.35
CHD1O14646 AC017037.3-201ENST00000625016 472 ntBASIC0.38□□□□□ -2.35
CHD1O14646 ENSAP3-201ENST00000312710 333 ntBASIC0.38□□□□□ -2.35
CHD1O14646 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.38□□□□□ -2.35
CHD1O14646 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.38□□□□□ -2.35
CHD1O14646 MTND5P14-201ENST00000441481 1267 ntBASIC0.38□□□□□ -2.35
CHD1O14646 MTCO3P17-201ENST00000443775 513 ntBASIC0.38□□□□□ -2.35
CHD1O14646 RNA5SP269-201ENST00000459032 137 ntBASIC0.38□□□□□ -2.35
CHD1O14646 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.38□□□□□ -2.35
CHD1O14646 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.38□□□□□ -2.35
CHD1O14646 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.38□□□□□ -2.35
CHD1O14646 AC068790.6-201ENST00000602558 258 ntBASIC0.38□□□□□ -2.35
CHD1O14646 AP001429.1-201ENST00000602568 530 ntBASIC0.38□□□□□ -2.35
CHD1O14646 AC004805.2-201ENST00000605382 482 ntBASIC0.38□□□□□ -2.35
CHD1O14646 AC012557.2-201ENST00000605919 418 ntBASIC0.38□□□□□ -2.35
CHD1O14646 AC107075.1-201ENST00000613695 314 ntBASIC0.38□□□□□ -2.35
CHD1O14646 SEC63P2-201ENST00000503863 1939 ntBASIC0.37□□□□□ -2.35
CHD1O14646 MTCO1P18-201ENST00000455518 1419 ntBASIC0.37□□□□□ -2.35
CHD1O14646 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.37□□□□□ -2.35
CHD1O14646 AC007435.1-201ENST00000421086 415 ntBASIC0.37□□□□□ -2.35
CHD1O14646 FAM204CP-201ENST00000424489 642 ntBASIC0.37□□□□□ -2.35
CHD1O14646 GTF2IP13-201ENST00000438487 386 ntBASIC0.37□□□□□ -2.35
CHD1O14646 AP001324.2-201ENST00000461163 319 ntBASIC0.37□□□□□ -2.35
CHD1O14646 MTND1P16-201ENST00000465177 898 ntBASIC0.37□□□□□ -2.35
CHD1O14646 AC084024.2-201ENST00000503480 791 ntBASIC0.37□□□□□ -2.35
CHD1O14646 AC109329.1-201ENST00000518744 317 ntBASIC0.37□□□□□ -2.35
CHD1O14646 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.37□□□□□ -2.35
CHD1O14646 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.37□□□□□ -2.35
CHD1O14646 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.37□□□□□ -2.35
CHD1O14646 VN1R88P-201ENST00000596787 292 ntBASIC0.37□□□□□ -2.35
CHD1O14646 AL138726.1-201ENST00000614873 333 ntBASIC0.37□□□□□ -2.35
CHD1O14646 AC138393.1-203ENST00000327086 343 ntBASIC0.36□□□□□ -2.35
CHD1O14646 RNU6-543P-201ENST00000362576 108 ntBASIC0.36□□□□□ -2.35
CHD1O14646 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.36□□□□□ -2.35
CHD1O14646 RNU6-546P-201ENST00000383991 107 ntBASIC0.36□□□□□ -2.35
CHD1O14646 RNU6-611P-201ENST00000384276 104 ntBASIC0.36□□□□□ -2.35
CHD1O14646 MIR19B1-201ENST00000384829 87 ntBASIC0.36□□□□□ -2.35
CHD1O14646 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.36□□□□□ -2.35
CHD1O14646 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
CHD1O14646 RNA5SP290-201ENST00000517133 127 ntBASIC0.36□□□□□ -2.35
CHD1O14646 IGLVI-20-201ENST00000519296 130 ntBASIC0.36□□□□□ -2.35
CHD1O14646 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.36□□□□□ -2.35
CHD1O14646 VN1R82P-201ENST00000601481 356 ntBASIC0.36□□□□□ -2.35
CHD1O14646 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.36□□□□□ -2.35
CHD1O14646 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.36□□□□□ -2.35
CHD1O14646 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
CHD1O14646 SNORA4.1-201ENST00000364263 144 ntBASIC0.35□□□□□ -2.35
CHD1O14646 RNU6-43P-201ENST00000384302 107 ntBASIC0.35□□□□□ -2.35
CHD1O14646 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
CHD1O14646 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CHD1O14646 AC002381.1-201ENST00000447049 280 ntBASIC0.35□□□□□ -2.35
CHD1O14646 AC010631.1-201ENST00000474150 156 ntBASIC0.35□□□□□ -2.35
CHD1O14646 RPL26P26-201ENST00000480251 434 ntBASIC0.35□□□□□ -2.35
CHD1O14646 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.35□□□□□ -2.35
CHD1O14646 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.35□□□□□ -2.35
CHD1O14646 MIR409-201ENST00000362237 79 ntBASIC0.35□□□□□ -2.35
CHD1O14646 RNU6-1280P-201ENST00000365211 107 ntBASIC0.35□□□□□ -2.35
CHD1O14646 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
CHD1O14646 RNU6-700P-201ENST00000391043 107 ntBASIC0.35□□□□□ -2.35
CHD1O14646 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.35□□□□□ -2.35
CHD1O14646 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.35□□□□□ -2.35
CHD1O14646 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.35□□□□□ -2.35
CHD1O14646 RNU6-667P-201ENST00000517186 102 ntBASIC0.35□□□□□ -2.35
CHD1O14646 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.35□□□□□ -2.35
CHD1O14646 AC068620.3-201ENST00000602749 560 ntBASIC0.35□□□□□ -2.35
CHD1O14646 AL671309.1-201ENST00000603750 544 ntBASIC0.35□□□□□ -2.35
CHD1O14646 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.35□□□□□ -2.35
CHD1O14646 AC134026.1-201ENST00000623249 2239 ntBASIC0.35□□□□□ -2.35
CHD1O14646 SNORD114-24-201ENST00000365029 72 ntBASIC0.34□□□□□ -2.36
CHD1O14646 PPP1R11P2-201ENST00000423543 382 ntBASIC0.34□□□□□ -2.36
CHD1O14646 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.34□□□□□ -2.36
CHD1O14646 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.34□□□□□ -2.36
CHD1O14646 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.34□□□□□ -2.36
CHD1O14646 RNU4-54P-201ENST00000516428 129 ntBASIC0.34□□□□□ -2.36
CHD1O14646 RNU6-586P-201ENST00000517265 104 ntBASIC0.34□□□□□ -2.36
CHD1O14646 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.34□□□□□ -2.36
CHD1O14646 AC018659.1-201ENST00000551083 169 ntBASIC0.34□□□□□ -2.36
CHD1O14646 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.34□□□□□ -2.36
CHD1O14646 RNU6-110P-201ENST00000384508 104 ntBASIC0.33□□□□□ -2.36
CHD1O14646 RNU2-33P-201ENST00000410344 192 ntBASIC0.33□□□□□ -2.36
CHD1O14646 AC005345.1-201ENST00000431868 217 ntBASIC0.33□□□□□ -2.36
CHD1O14646 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.33□□□□□ -2.36
CHD1O14646 UBE2V1P8-201ENST00000437166 265 ntBASIC0.33□□□□□ -2.36
CHD1O14646 MTND4P6-201ENST00000438297 472 ntBASIC0.33□□□□□ -2.36
CHD1O14646 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.33□□□□□ -2.36
CHD1O14646 RNU6-581P-201ENST00000516214 105 ntBASIC0.33□□□□□ -2.36
CHD1O14646 RNU6-678P-201ENST00000516832 109 ntBASIC0.33□□□□□ -2.36
CHD1O14646 AC090142.3-201ENST00000519012 385 ntBASIC0.33□□□□□ -2.36
CHD1O14646 ARL2BPP5-201ENST00000523141 481 ntBASIC0.33□□□□□ -2.36
CHD1O14646 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CHD1O14646 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.33□□□□□ -2.36
CHD1O14646 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.33□□□□□ -2.36
CHD1O14646 BNIP3P26-201ENST00000600827 554 ntBASIC0.33□□□□□ -2.36
CHD1O14646 Z83818.1-201ENST00000603584 150 ntBASIC0.33□□□□□ -2.36
CHD1O14646 AC090578.1-201ENST00000604955 591 ntBASIC0.33□□□□□ -2.36
CHD1O14646 AL583856.2-201ENST00000606298 543 ntBASIC0.33□□□□□ -2.36
CHD1O14646 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms