Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNU6-1092P-201ENST00000516955 87 ntBASIC2.41□□□□□ -2.02
CUX2O14529 SNORD19.2-201ENST00000516978 73 ntBASIC2.41□□□□□ -2.02
CUX2O14529 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CUX2O14529 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.41□□□□□ -2.02
CUX2O14529 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.41□□□□□ -2.02
CUX2O14529 ANP32BP3-201ENST00000559213 706 ntBASIC2.41□□□□□ -2.02
CUX2O14529 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.41□□□□□ -2.02
CUX2O14529 MIR4782-201ENST00000577987 79 ntBASIC2.41□□□□□ -2.02
CUX2O14529 AC024619.4-201ENST00000580924 316 ntBASIC2.41□□□□□ -2.02
CUX2O14529 AC090616.2-202ENST00000584248 222 ntBASIC2.41□□□□□ -2.02
CUX2O14529 AL358072.1-201ENST00000604156 575 ntBASIC2.41□□□□□ -2.02
CUX2O14529 AC103810.8-201ENST00000607347 118 ntBASIC2.41□□□□□ -2.02
CUX2O14529 AC108747.1-201ENST00000609508 535 ntBASIC2.41□□□□□ -2.02
CUX2O14529 MIR7844-201ENST00000616161 122 ntBASIC2.41□□□□□ -2.02
CUX2O14529 AC023510.2-201ENST00000622162 746 ntBASIC2.41□□□□□ -2.02
CUX2O14529 Z99571.1-201ENST00000636677 394 ntBASIC2.41□□□□□ -2.02
CUX2O14529 MTND5P42-201ENST00000637720 498 ntBASIC2.41□□□□□ -2.02
CUX2O14529 SNORA38-201ENST00000363946 132 ntBASIC2.4□□□□□ -2.02
CUX2O14529 SMIM11P1-201ENST00000369586 178 ntBASIC2.4□□□□□ -2.02
CUX2O14529 RNU5A-2P-201ENST00000384337 116 ntBASIC2.4□□□□□ -2.02
CUX2O14529 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CUX2O14529 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.4□□□□□ -2.02
CUX2O14529 AL161651.1-201ENST00000440882 223 ntBASIC2.4□□□□□ -2.02
CUX2O14529 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.4□□□□□ -2.02
CUX2O14529 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.02
CUX2O14529 RNU6-581P-201ENST00000516214 105 ntBASIC2.4□□□□□ -2.02
CUX2O14529 RNU6-677P-201ENST00000516914 101 ntBASIC2.4□□□□□ -2.02
CUX2O14529 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
CUX2O14529 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.4□□□□□ -2.02
CUX2O14529 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.4□□□□□ -2.02
CUX2O14529 ZNF519P3-201ENST00000557158 1032 ntBASIC2.4□□□□□ -2.02
CUX2O14529 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.02
CUX2O14529 MIR4760-201ENST00000585040 80 ntBASIC2.4□□□□□ -2.02
CUX2O14529 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.4□□□□□ -2.02
CUX2O14529 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.4□□□□□ -2.02
CUX2O14529 AC131159.1-201ENST00000621854 213 ntBASIC2.4□□□□□ -2.02
CUX2O14529 TEX21P-201ENST00000447107 1476 ntBASIC2.4□□□□□ -2.03
CUX2O14529 AC073343.1-201ENST00000328239 651 ntBASIC2.39□□□□□ -2.03
CUX2O14529 U8.1-201ENST00000362843 134 ntBASIC2.39□□□□□ -2.03
CUX2O14529 RNU6-817P-201ENST00000391083 104 ntBASIC2.39□□□□□ -2.03
CUX2O14529 U3.40-201ENST00000408706 208 ntBASIC2.39□□□□□ -2.03
CUX2O14529 Y_RNA.608-201ENST00000410647 95 ntBASIC2.39□□□□□ -2.03
CUX2O14529 RNU6-1328P-201ENST00000410938 106 ntBASIC2.39□□□□□ -2.03
CUX2O14529 AC093106.2-201ENST00000428212 385 ntBASIC2.39□□□□□ -2.03
CUX2O14529 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.39□□□□□ -2.03
CUX2O14529 MTND5P25-201ENST00000430499 799 ntBASIC2.39□□□□□ -2.03
CUX2O14529 FABP5P14-201ENST00000437273 393 ntBASIC2.39□□□□□ -2.03
CUX2O14529 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.39□□□□□ -2.03
CUX2O14529 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.39□□□□□ -2.03
CUX2O14529 AL121769.1-201ENST00000469473 401 ntBASIC2.39□□□□□ -2.03
CUX2O14529 AC010587.1-201ENST00000505809 469 ntBASIC2.39□□□□□ -2.03
CUX2O14529 BTF3P12-201ENST00000519620 469 ntBASIC2.39□□□□□ -2.03
CUX2O14529 AC022878.1-201ENST00000530684 149 ntBASIC2.39□□□□□ -2.03
CUX2O14529 MIR5697-201ENST00000578045 78 ntBASIC2.39□□□□□ -2.03
CUX2O14529 MIR4765-201ENST00000585007 77 ntBASIC2.39□□□□□ -2.03
CUX2O14529 AL391813.1-201ENST00000603098 260 ntBASIC2.39□□□□□ -2.03
CUX2O14529 AC022893.3-201ENST00000607665 437 ntBASIC2.39□□□□□ -2.03
CUX2O14529 AC130324.3-201ENST00000614165 542 ntBASIC2.39□□□□□ -2.03
CUX2O14529 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CUX2O14529 RNU6-511P-201ENST00000363496 107 ntBASIC2.39□□□□□ -2.03
CUX2O14529 RNU5E-5P-201ENST00000365379 116 ntBASIC2.39□□□□□ -2.03
CUX2O14529 RNU6-946P-201ENST00000383878 107 ntBASIC2.39□□□□□ -2.03
CUX2O14529 RNU6-1083P-201ENST00000384022 107 ntBASIC2.39□□□□□ -2.03
CUX2O14529 MIR218-1-201ENST00000384999 110 ntBASIC2.39□□□□□ -2.03
CUX2O14529 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.39□□□□□ -2.03
CUX2O14529 Z99497.1-201ENST00000421282 135 ntBASIC2.39□□□□□ -2.03
CUX2O14529 AC007560.1-201ENST00000426912 237 ntBASIC2.39□□□□□ -2.03
CUX2O14529 ZNF114P1-201ENST00000453500 292 ntBASIC2.39□□□□□ -2.03
CUX2O14529 MTCYBP18-201ENST00000501056 747 ntBASIC2.39□□□□□ -2.03
CUX2O14529 RNU7-51P-201ENST00000516560 62 ntBASIC2.39□□□□□ -2.03
CUX2O14529 RNU6-572P-201ENST00000516724 80 ntBASIC2.39□□□□□ -2.03
CUX2O14529 RNU6-1183P-201ENST00000517054 60 ntBASIC2.39□□□□□ -2.03
CUX2O14529 AC036111.3-201ENST00000526389 112 ntBASIC2.39□□□□□ -2.03
CUX2O14529 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.39□□□□□ -2.03
CUX2O14529 AC023824.2-201ENST00000566185 400 ntBASIC2.39□□□□□ -2.03
CUX2O14529 ROCK1P1-201ENST00000573767 549 ntBASIC2.39□□□□□ -2.03
CUX2O14529 MIR1273C-201ENST00000578669 77 ntBASIC2.39□□□□□ -2.03
CUX2O14529 AC135507.1-201ENST00000607214 561 ntBASIC2.39□□□□□ -2.03
CUX2O14529 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.39□□□□□ -2.03
CUX2O14529 uc_338.14-201ENST00000613162 166 ntBASIC2.39□□□□□ -2.03
CUX2O14529 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.39□□□□□ -2.03
CUX2O14529 MTND5P30-201ENST00000452896 1731 ntBASIC2.38□□□□□ -2.03
CUX2O14529 SNORD56.2-201ENST00000363242 71 ntBASIC2.38□□□□□ -2.03
CUX2O14529 RNY1P12-201ENST00000364251 105 ntBASIC2.38□□□□□ -2.03
CUX2O14529 Y_RNA.598-201ENST00000410480 95 ntBASIC2.38□□□□□ -2.03
CUX2O14529 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.38□□□□□ -2.03
CUX2O14529 AL589872.1-201ENST00000426602 288 ntBASIC2.38□□□□□ -2.03
CUX2O14529 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.38□□□□□ -2.03
CUX2O14529 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.38□□□□□ -2.03
CUX2O14529 AL591212.2-201ENST00000433923 257 ntBASIC2.38□□□□□ -2.03
CUX2O14529 MTND1P30-201ENST00000441241 901 ntBASIC2.38□□□□□ -2.03
CUX2O14529 UBE2D3P4-201ENST00000441973 436 ntBASIC2.38□□□□□ -2.03
CUX2O14529 COX6CP12-201ENST00000446748 202 ntBASIC2.38□□□□□ -2.03
CUX2O14529 USP9YP12-201ENST00000450481 570 ntBASIC2.38□□□□□ -2.03
CUX2O14529 RPL30P6-201ENST00000475925 342 ntBASIC2.38□□□□□ -2.03
CUX2O14529 AP000797.1-201ENST00000478870 387 ntBASIC2.38□□□□□ -2.03
CUX2O14529 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.38□□□□□ -2.03
CUX2O14529 SCARNA3-201ENST00000517097 143 ntBASIC2.38□□□□□ -2.03
CUX2O14529 AP003181.2-201ENST00000528941 181 ntBASIC2.38□□□□□ -2.03
CUX2O14529 AC006199.1-201ENST00000548728 219 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms