Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RN7SL863P-201ENST00000462370 296 ntBASIC3.33□□□□□ -1.88
FOXN3O00409 AC109925.1-201ENST00000478069 331 ntBASIC3.33□□□□□ -1.88
FOXN3O00409 AK3P2-201ENST00000507976 429 ntBASIC3.33□□□□□ -1.88
FOXN3O00409 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXN3O00409 MRPS36P2-201ENST00000512569 299 ntBASIC3.33□□□□□ -1.88
FOXN3O00409 RNU6-559P-201ENST00000516151 98 ntBASIC3.33□□□□□ -1.88
FOXN3O00409 AC245166.1-201ENST00000521012 253 ntBASIC3.33□□□□□ -1.88
FOXN3O00409 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXN3O00409 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXN3O00409 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXN3O00409 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXN3O00409 FRG2DP-202ENST00000566967 323 ntBASIC3.33□□□□□ -1.88
FOXN3O00409 AC022432.1-201ENST00000595739 310 ntBASIC3.33□□□□□ -1.88
FOXN3O00409 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXN3O00409 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXN3O00409 GABRG2-229ENST00000641017 3628 ntBASIC3.33□□□□□ -1.88
FOXN3O00409 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXN3O00409 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXN3O00409 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FOXN3O00409 RNU6-562P-201ENST00000362731 107 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 Y_RNA.301-201ENST00000364990 103 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 Y_RNA.579-201ENST00000390939 94 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 RNU6-750P-201ENST00000390946 107 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 MIR548F5-201ENST00000408421 86 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 RNU4-47P-201ENST00000410876 114 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 NCOR1P3-201ENST00000420479 303 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 PTGES3P4-201ENST00000426243 356 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 Z96811.1-201ENST00000445880 108 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.32□□□□□ -1.88
FOXN3O00409 AC006026.2-201ENST00000457376 180 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 AC107626.1-201ENST00000471084 183 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 RPL7P49-201ENST00000471402 708 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 RN7SL20P-201ENST00000488827 297 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 GZMAP1-201ENST00000503054 631 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 AC092436.3-201ENST00000511788 257 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 SNORA43.2-201ENST00000516652 128 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXN3O00409 AC007151.1-201ENST00000572774 483 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 MIR5680-201ENST00000577577 84 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 MIR4790-201ENST00000577799 79 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 POLR3GP2-201ENST00000588366 668 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 AC078899.3-201ENST00000599065 212 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 AC113139.1-201ENST00000605049 239 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 AC107294.3-201ENST00000609211 526 ntBASIC3.32□□□□□ -1.88
FOXN3O00409 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXN3O00409 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FOXN3O00409 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXN3O00409 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXN3O00409 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXN3O00409 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FOXN3O00409 MIR369-201ENST00000362155 70 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 SNORD56.1-201ENST00000362913 68 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 RNU6-1227P-201ENST00000383981 107 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 SNORD15B-201ENST00000384714 146 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 MIR7-3-201ENST00000384898 110 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 RNU6-1106P-201ENST00000390845 107 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 AC005534.2-201ENST00000431047 433 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXN3O00409 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.31□□□□□ -1.88
FOXN3O00409 SNORD19B-201ENST00000459623 84 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXN3O00409 RPL39P5-202ENST00000512505 151 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.31□□□□□ -1.88
FOXN3O00409 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.31□□□□□ -1.88
FOXN3O00409 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.31□□□□□ -1.88
FOXN3O00409 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXN3O00409 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXN3O00409 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXN3O00409 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXN3O00409 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXN3O00409 AC008739.2-201ENST00000597006 317 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXN3O00409 AL670379.10-201ENST00000604330 253 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 AL670379.9-201ENST00000605428 253 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 AL138726.1-201ENST00000614873 333 ntBASIC3.31□□□□□ -1.88
FOXN3O00409 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FOXN3O00409 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXN3O00409 AC138915.1-201ENST00000565427 1685 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXN3O00409 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXN3O00409 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXN3O00409 RNU6-942P-201ENST00000363002 107 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 Y_RNA.216-201ENST00000364205 93 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 Y_RNA.326-201ENST00000365176 113 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 RNU6-1329P-201ENST00000365664 107 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 Y_RNA.387-201ENST00000383918 102 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 RNU6-128P-201ENST00000383976 107 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 SNORD67-201ENST00000390833 111 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 AC245054.2-201ENST00000415639 319 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 RPL7P37-201ENST00000425095 738 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXN3O00409 RPL32P28-201ENST00000443577 397 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.3□□□□□ -1.88
FOXN3O00409 PRSS3P4-201ENST00000453323 162 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 RN7SL75P-201ENST00000461926 281 ntBASIC3.3□□□□□ -1.88
FOXN3O00409 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXN3O00409 AC018437.1-201ENST00000492214 406 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms