Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.71□□□□□ -1.66
USP17L11C9JVI0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 SNORA71.3-201ENST00000362582 128 ntBASIC4.7□□□□□ -1.66
USP17L11C9JVI0 RNU6-159P-201ENST00000391080 106 ntBASIC4.7□□□□□ -1.66
USP17L11C9JVI0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 WARS2P1-201ENST00000429678 537 ntBASIC4.7□□□□□ -1.66
USP17L11C9JVI0 AC104332.1-201ENST00000440471 797 ntBASIC4.7□□□□□ -1.66
USP17L11C9JVI0 AC073901.1-201ENST00000462471 408 ntBASIC4.7□□□□□ -1.66
USP17L11C9JVI0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 RPS29P20-201ENST00000489592 171 ntBASIC4.7□□□□□ -1.66
USP17L11C9JVI0 AC006445.2-201ENST00000510061 472 ntBASIC4.7□□□□□ -1.66
USP17L11C9JVI0 RNU6-581P-201ENST00000516214 105 ntBASIC4.7□□□□□ -1.66
USP17L11C9JVI0 RNU6-58P-201ENST00000517143 103 ntBASIC4.7□□□□□ -1.66
USP17L11C9JVI0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 AC008739.3-201ENST00000603262 127 ntBASIC4.7□□□□□ -1.66
USP17L11C9JVI0 AC024220.1-201ENST00000603675 484 ntBASIC4.7□□□□□ -1.66
USP17L11C9JVI0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USP17L11C9JVI0 Y_RNA.44-201ENST00000362676 108 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 RNU6-487P-201ENST00000365430 104 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 RNU6-326P-201ENST00000365480 107 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 RNA5SP239-201ENST00000410218 129 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 Y_RNA.793-201ENST00000411222 111 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 RNU6-1001P-201ENST00000411265 100 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 AL390729.2-201ENST00000416137 156 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 BPY2DP-201ENST00000422208 265 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.69□□□□□ -1.66
USP17L11C9JVI0 AC244670.1-201ENST00000436879 112 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.69□□□□□ -1.66
USP17L11C9JVI0 RNA5SP310-201ENST00000459084 116 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 RNU1-61P-201ENST00000516107 151 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 RNU7-110P-201ENST00000516891 62 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 RNU2-31P-201ENST00000516954 155 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 HIGD1AP1-201ENST00000550979 275 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 AL391261.3-201ENST00000557194 520 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 AC026470.2-201ENST00000561492 181 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 UBL5P4-201ENST00000562584 236 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.69□□□□□ -1.66
USP17L11C9JVI0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.69□□□□□ -1.66
USP17L11C9JVI0 AL359198.2-201ENST00000611836 194 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.69□□□□□ -1.66
USP17L11C9JVI0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP17L11C9JVI0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP17L11C9JVI0 AC106871.1-201ENST00000568324 3102 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.69□□□□□ -1.66
USP17L11C9JVI0 AL079305.1-201ENST00000623159 3008 ntBASIC4.69□□□□□ -1.66
USP17L11C9JVI0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP17L11C9JVI0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP17L11C9JVI0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 Y_RNA.150-201ENST00000363562 102 ntBASIC4.68□□□□□ -1.66
USP17L11C9JVI0 RNU5F-3P-201ENST00000363767 117 ntBASIC4.68□□□□□ -1.66
USP17L11C9JVI0 SNORD115-8-201ENST00000363856 82 ntBASIC4.68□□□□□ -1.66
USP17L11C9JVI0 SNORD115-38-201ENST00000365037 82 ntBASIC4.68□□□□□ -1.66
USP17L11C9JVI0 RNU6-281P-201ENST00000384212 103 ntBASIC4.68□□□□□ -1.66
USP17L11C9JVI0 SNORA1.3-201ENST00000384676 136 ntBASIC4.68□□□□□ -1.66
USP17L11C9JVI0 MIR449B-201ENST00000384995 97 ntBASIC4.68□□□□□ -1.66
USP17L11C9JVI0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 AL358075.3-201ENST00000426289 226 ntBASIC4.68□□□□□ -1.66
USP17L11C9JVI0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 AC021739.1-201ENST00000559631 174 ntBASIC4.68□□□□□ -1.66
USP17L11C9JVI0 AL121772.2-201ENST00000614331 297 ntBASIC4.68□□□□□ -1.66
USP17L11C9JVI0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 AC068254.2-201ENST00000623938 3577 ntBASIC4.68□□□□□ -1.66
USP17L11C9JVI0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
USP17L11C9JVI0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
USP17L11C9JVI0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP17L11C9JVI0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.67□□□□□ -1.66
USP17L11C9JVI0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
USP17L11C9JVI0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP17L11C9JVI0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.67□□□□□ -1.66
USP17L11C9JVI0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
USP17L11C9JVI0 RNA5SP124-201ENST00000362739 110 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms