Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PALM3A6NDB9 AL157777.2-201ENST00000258070 137 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 RNA5SP361-201ENST00000362686 118 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 RNA5SP130-201ENST00000364431 114 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 RNU6-487P-201ENST00000365430 104 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 MIR708-201ENST00000390708 88 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 RNA5SP213-201ENST00000391031 106 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 AL591034.1-201ENST00000407447 340 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.81□□□□□ -1.64
PALM3A6NDB9 RN7SL604P-201ENST00000492589 296 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 AC024405.2-202ENST00000532731 184 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 AC006199.1-201ENST00000548728 219 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 AC007224.1-201ENST00000564410 144 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 MTND6P33-201ENST00000571794 183 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.81□□□□□ -1.64
PALM3A6NDB9 AC015813.4-201ENST00000610469 179 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 MIR6076-201ENST00000617521 113 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.81□□□□□ -1.64
PALM3A6NDB9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PALM3A6NDB9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PALM3A6NDB9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PALM3A6NDB9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PALM3A6NDB9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PALM3A6NDB9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PALM3A6NDB9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.8□□□□□ -1.64
PALM3A6NDB9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PALM3A6NDB9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PALM3A6NDB9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PALM3A6NDB9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
PALM3A6NDB9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PALM3A6NDB9 AL079305.1-201ENST00000623159 3008 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PALM3A6NDB9 MIR411-201ENST00000362239 96 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 RNU6-545P-201ENST00000362681 104 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 Y_RNA.76-201ENST00000362931 109 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 RNU6-746P-201ENST00000384112 109 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 RNU6-378P-201ENST00000384324 107 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 RNU4-30P-201ENST00000410245 143 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 RNU2-37P-201ENST00000410695 177 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 RNU5A-5P-201ENST00000411054 116 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 RPL23AP82-202ENST00000427528 469 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 AC244670.1-201ENST00000436879 112 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.8□□□□□ -1.64
PALM3A6NDB9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.8□□□□□ -1.64
PALM3A6NDB9 SNORA25.14-201ENST00000516481 132 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 RNU2-31P-201ENST00000516954 155 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 AP002392.1-201ENST00000537692 208 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 CBX3P4-201ENST00000538909 354 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.8□□□□□ -1.64
PALM3A6NDB9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.8□□□□□ -1.64
PALM3A6NDB9 MIR5695-201ENST00000579717 85 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 MIR432-201ENST00000606207 94 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 AC068724.3-201ENST00000625906 87 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PALM3A6NDB9 AF117829.1-206ENST00000621883 3802 ntBASIC4.8□□□□□ -1.64
PALM3A6NDB9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PALM3A6NDB9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PALM3A6NDB9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PALM3A6NDB9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PALM3A6NDB9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PALM3A6NDB9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PALM3A6NDB9 RNU5F-3P-201ENST00000363767 117 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 RNU6-326P-201ENST00000365480 107 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 U8.10-201ENST00000384260 133 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 SNORA37-201ENST00000384504 129 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 RNU6-21P-201ENST00000384710 107 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 MIR10B-201ENST00000385011 110 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 RNU6-159P-201ENST00000391080 106 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 AL358075.3-201ENST00000426289 226 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 WARS2P1-201ENST00000429678 537 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.79□□□□□ -1.64
PALM3A6NDB9 RPS26P28-201ENST00000470806 348 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.79□□□□□ -1.64
PALM3A6NDB9 RNU7-110P-201ENST00000516891 62 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 ACA59.2-201ENST00000517061 156 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.79□□□□□ -1.64
PALM3A6NDB9 AL359198.2-201ENST00000611836 194 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.79□□□□□ -1.64
PALM3A6NDB9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PALM3A6NDB9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PALM3A6NDB9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.79□□□□□ -1.64
PALM3A6NDB9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PALM3A6NDB9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PALM3A6NDB9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
PALM3A6NDB9 AC073073.2-201ENST00000609827 2578 ntBASIC4.78□□□□□ -1.64
PALM3A6NDB9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.78□□□□□ -1.64
PALM3A6NDB9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PALM3A6NDB9 SNORD115-8-201ENST00000363856 82 ntBASIC4.78□□□□□ -1.64
PALM3A6NDB9 Y_RNA.286-201ENST00000364813 102 ntBASIC4.78□□□□□ -1.64
PALM3A6NDB9 SNORD115-38-201ENST00000365037 82 ntBASIC4.78□□□□□ -1.64
PALM3A6NDB9 Y_RNA.464-201ENST00000384282 110 ntBASIC4.78□□□□□ -1.64
PALM3A6NDB9 Y_RNA.569-201ENST00000384749 103 ntBASIC4.78□□□□□ -1.64
PALM3A6NDB9 PCNPP3-201ENST00000393579 471 ntBASIC4.78□□□□□ -1.64
PALM3A6NDB9 AC005300.1-201ENST00000428401 373 ntBASIC4.78□□□□□ -1.64
PALM3A6NDB9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.78□□□□□ -1.64
PALM3A6NDB9 RPL39P29-201ENST00000447779 157 ntBASIC4.78□□□□□ -1.64
PALM3A6NDB9 AC107393.1-201ENST00000512403 346 ntBASIC4.78□□□□□ -1.64
PALM3A6NDB9 RNU6-58P-201ENST00000517143 103 ntBASIC4.78□□□□□ -1.64
PALM3A6NDB9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.78□□□□□ -1.64
PALM3A6NDB9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms